Detail information of GWHGAAEX018796/evm.TU.scaffold_99.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108762664|ref|YP_633997.1|3.00E-65metallo-beta-lactamase [Myxococcus xanthus DK 1622]
KOGKOG08147.00E-125Glyoxylase
nrgi|565363259|ref|XP_006348355.1|8.38E-138PREDICTED: persulfide dioxygenase ETHE1 homolog, mitochondrial-like [Solanum tuberosum]
Swissprottr|Q9C8L4|ETHE1_ARATH2.00E-125Persulfide dioxygenase ETHE1 homolog, mitochondrial (Precursor)
trEMBLtr|M1AA55|M1AA55_SOLTU2.00E-136Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400018171}
TAIRAT1G535807.00E-125glyoxalase II 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000098133560170983-
Transcript Sequence

Network for GWHGAAEX018796

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00753.26Lactamase_B822065.60E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K17725ETHE1 Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Sulfur metabolismmap00920

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.580
SRR2545915Juvenile tuber21.460
SRP108465SRR5643513five period of Gastrodia elata20.250
SRR5643514five period of Gastrodia elata24.120
SRR5643515five period of Gastrodia elata18.160
SRR5643524five period of Gastrodia elata20.560
SRR5643525five period of Gastrodia elata17.360
SRR5643528five period of Gastrodia elata16.370
SRR5643658five period of Gastrodia elata21.410
SRR5643659five period of Gastrodia elata16.050
SRR5643660five period of Gastrodia elata19.360
SRR5643661five period of Gastrodia elata17.730
SRR5643662five period of Gastrodia elata21.180
SRR5643663five period of Gastrodia elata19.190
SRR5643664five period of Gastrodia elata22.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.740
SRR6049655Rhizomagastrodiae_C368-T10_good_120.500
SRR6049656Rhizomagastrodiae_C368-T07_good_119.980
SRR6049657Rhizomagastrodiae_C368-T07_good_122.150
SRR6049658Rhizomagastrodiae_C368-T04_good_115.790
SRR6049659Rhizomagastrodiae_C368-T04_good_118.050
SRR6049660Rhizomagastrodiae_C368-T01_good_122.130
SRR6049661Rhizomagastrodiae_C368-T04_good_118.360
SRR6049662Rhizomagastrodiae_C368-T01_good_122.740
SRR6049663Rhizomagastrodiae_C368-T01_good_121.060
SRR6049664Rhizomagastrodiae_C368-T10_good_123.210
SRR6049665Rhizomagastrodiae_C368-T10_good_123.210
SRP279888GastroGastrodia elata tuber 30.23
JuvenJuvenile tuber36.75
Mother_GastroMother tuber of Gastrodia elata 20.88
Mother_JuvenMother tuber of Juvenile 30.07