Detail information of GWHGAAEX018798/evm.TU.scaffold_99.5
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|384135000|ref|YP_005517714.1| | 9.00E-11 | serine/threonine protein kinase with PASTA sensor(s) [Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1] |
| nr | gi|672131620|ref|XP_008789371.1| | 3.89E-150 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1 [Phoenix dactylifera] |
| Swissprot | tr|C0LGQ4|MRH1_ARATH | 3.00E-130 | Probable LRR receptor-like serine/threonine-protein kinase MRH1 (Precursor) |
| trEMBL | tr|W5D0C1|W5D0C1_WHEAT | 1.00E-146 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_3B_9B32D6017.2} |
| TAIR | AT4G18640 | 5.00E-128 | Leucine-rich repeat protein kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000098 | 237638 | 239325 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018798
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 152 | 399 | 3.30E-23 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_LRR-VI-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 9.130 |
| SRR2545915 | Juvenile tuber | 9.920 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 10.110 |
| SRR5643514 | five period of Gastrodia elata | 9.460 | |
| SRR5643515 | five period of Gastrodia elata | 9.730 | |
| SRR5643524 | five period of Gastrodia elata | 10.310 | |
| SRR5643525 | five period of Gastrodia elata | 19.120 | |
| SRR5643528 | five period of Gastrodia elata | 19.690 | |
| SRR5643658 | five period of Gastrodia elata | 22.910 | |
| SRR5643659 | five period of Gastrodia elata | 9.490 | |
| SRR5643660 | five period of Gastrodia elata | 11.500 | |
| SRR5643661 | five period of Gastrodia elata | 13.480 | |
| SRR5643662 | five period of Gastrodia elata | 16.210 | |
| SRR5643663 | five period of Gastrodia elata | 14.890 | |
| SRR5643664 | five period of Gastrodia elata | 14.940 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 6.700 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 10.180 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 7.470 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.050 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 3.580 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 4.680 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.530 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.960 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.850 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 5.110 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 10.320 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 10.320 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 15.25 |
| Juven | Juvenile tuber | 7.38 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 34.70 | |
| Mother_Juven | Mother tuber of Juvenile | 15.17 |