Detail information of GWHGAAEX018801/evm.TU.scaffold_99.8
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|521459512|ref|YP_008152859.1| | 4.00E-150 | proline iminopeptidase [Sorangium cellulosum So0157-2] |
| nr | gi|743795879|ref|XP_010924590.1| | 0 | PREDICTED: proline iminopeptidase isoform X1 [Elaeis guineensis] |
| Swissprot | tr|P93732|PIP_ARATH | 0 | Proline iminopeptidase |
| trEMBL | tr|M0TKK2|M0TKK2_MUSAM | 0 | Proline iminopeptidase {ECO:0000256|RuleBase:RU003421} |
| TAIR | AT2G14260 | 0 | proline iminopeptidase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000098 | 334445 | 369428 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018801
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00561.19 | Abhydrolase_1 | 128 | 390 | 2.70E-28 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01259 | pip | Metabolic pathways | map01100 |
| Arginine and proline metabolism | map00330 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006508 | Biological Process | proteolysis |
| GO:0004177 | Molecular Function | aminopeptidase activity |
| GO:0008233 | Molecular Function | peptidase activity |
| GO:0005737 | Cellular Component | cytoplasm |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 35.440 |
| SRR2545915 | Juvenile tuber | 50.840 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 50.620 |
| SRR5643514 | five period of Gastrodia elata | 62.640 | |
| SRR5643515 | five period of Gastrodia elata | 57.100 | |
| SRR5643524 | five period of Gastrodia elata | 61.950 | |
| SRR5643525 | five period of Gastrodia elata | 30.610 | |
| SRR5643528 | five period of Gastrodia elata | 33.070 | |
| SRR5643658 | five period of Gastrodia elata | 40.090 | |
| SRR5643659 | five period of Gastrodia elata | 48.810 | |
| SRR5643660 | five period of Gastrodia elata | 48.900 | |
| SRR5643661 | five period of Gastrodia elata | 47.620 | |
| SRR5643662 | five period of Gastrodia elata | 50.350 | |
| SRR5643663 | five period of Gastrodia elata | 50.560 | |
| SRR5643664 | five period of Gastrodia elata | 46.610 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 56.930 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 53.660 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 55.900 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 51.250 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 55.940 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 52.490 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 50.880 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 48.590 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 62.230 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 50.110 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 69.950 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 69.950 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 54.77 |
| Juven | Juvenile tuber | 52.48 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 37.96 | |
| Mother_Juven | Mother tuber of Juvenile | 53.81 |