Gene detail

Detail information of GWHGAAEX018806/evm.TU.scaffold_99.13

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1171	8.00E-142	Metallothionein-like protein
nr	gi\|743795849\|ref\|XP_010924583.1\|	0	PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q9SZD1\|TCX5_ARATH	2.00E-142	Protein tesmin/TSO1-like CXC 5
trEMBL	tr\|M0S6F6\|M0S6F6_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P09150_001}
TAIR	AT4G29000	8.00E-142	Tesmin/TSO1-like CXC domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000098	399606	434372	-

Transcript Sequence
>GWHTAAEX018806 TTGAAGCTGCCTTAGCATCCATCCGTCCAATATTAGAATTTGATTTCAAATGCAGAGGGAGAGAAAAAGATAATCGAGAGAGAGACGGAGAGAGAGGAAGAAGGCTTTTTAGCTCTCCACCTCCTCTTCTTCCTGATCACTGCTTCTACCCCTTCTCAAAATTTTCCCCGTAGCTCTCTCGCAGCGCAGGAGAAAGAAGTGGAAACGGGGAGAGATAGGTGCAAATTATCTCCAAAGAATCGTTCTTTCGTCTTCGTTCGAATCCTCCTTTCCAGCACCGGATCTCCGCATCGCGATTCCTCTCCGGCTGTATGGATTTCCCCTCCATTCGATCGATTCTTACCGGATGATTCTGCTTTCTTATCTGGATGAAAAGCTTTGGGAAATCGCTTGAGGAGATGGGGGAGGAAGGCCGTTGGAAGAGGAACTGAGAACTCGTGTGTCTGCGATACTGGGCCTTTGGGTTGTTCATTTGTCCATTCATTCAATGGAGCAAGGAATTCAATCGGCGTCATCGGATTTGCCTTCGAAGAAGCTCGTTCGGCAGTTGGATTTCACTTCGGCGTACTGCGGGGTTCCGGCGGTGGTGGCGGCAGTGGGGACGCCGCCACCCCATGAACAGCAACATTTGCAATCGCTGCAGAAGCAGATGCACGCTCCTTCGATTCCCATGCCACGCCCTTCAATTTCTATGCCTTCAAAACCTGAATCACCGAGAACAAGGTCAAGGCCCTTATTTGAAATGAAAGAAGGTACACCAACAAGAAAAAAGAACTGCAATTGCAAACATTCAAGATGCTTGAAGCTGTATTGCGAGTGTTTTGCATCTGGAGTTTATTGTGATGGGTGTAACTGTGCAAACTGCTGCAACAATGTTGAGAATGAAGCAACTAGGCACGAAGCTGTTGAAGCTACTCTAGAACGCAATCCCAATGCTTTTAGGCCAAAGATTGGAAATAGCCCCCATTCGGTTAGAGATAGTAGGGAAGATGCATGTGAGACTACTTTGGTGAGTAAACATAATAAAGGTTGCCATTGCAAGAAATCAGGGTGCCTTAAAAAGTATTGTGAGTGTTTTCAGGCCAATATTCTCTGCTCTGATAATTGCAAATGTATTGACTGCAAAAATTTTGATGGGAGTGAAGAGAGAAAGGCTATTCACCATGTAGATCATGGCAATGCTTTGGTTTACATGCAGCAGGCAGCGAATGCTGCACTAAATGGGGCTATAGGCCCCTCAGGCTTTTTTTCGCCAGCATCGAAGAAGCGGAAGCACCAGGATCTTTATTTTGGCACATCAGCAAAAGATCATTCTAATCACAGTCTAGTGCAATACCCACATGCTGGTCATGTGAAGACATCAGGTTCTGCTTCTCTTACTTCTGTTCCTTCTGGTAATGCTGTTAATTCAACTCCTCTAGGATCTGCAAAAGCTACCTATAGGCCATTGCTAGCAGACATTGTACATGCGGAGGATGTAAAGGAGTTATGCCGGATTTTGGTTGTAGTATCGGGAGAGGCTGCTAAAACAGCTGCTAACAAAATTATTCAAGAGGACAAGCATCTTGATATGGAGGAGCACGCAGAGAGTTCACTTGATTTATCAAACAACGATAAAATTGATAGTGTTACACGGTCTGATCTGCAGAAAACATCAGTTGATGACCGGTTAAGTGGCTCACATGCGGACAAAATGGCAGAAGAGTCTGGTTCTGACTTGGCGGATGGTCAGAAAGGTAGAAGGCCTATGTCTCCTGGAACACTAGCACTAATGTGTGATGAGCAGGATATGCTATGCATGACATCTCAAAGCAATAATCTACCTAGAAGGCTCCCCAATGATCAGAGAATGACAAAGGTGTATGCAGAGCAAGAGAAATGTGTACTGATGGCATTTCGTGAATCTCTACTTAAGCTTATCAATTGTGGAACAGCAAAAGAAGCAAAGTTCTCCTCGATGTCTCTGAAAGCGGAAGCTTCGGGCCATGAGGATCCAACCTCCAACAACAATTGCAGAACACGGGCTTCCGTCATCTCCCAGGTTCCTCAGGGTGTTGTAAATACATTTCCTGCTTCTTCTTCTTCAAATCATAATAGCCATTTACCTTTACCTGCTCGAAATCAAACACTAGAGAATGGTGCCTTAAAACATAAGGTTGAGAATATTGAGATGTAGAAAAAGTAATAAATATAGCAATCTCTTCAAGTGAGGTTACTACCTATTTATTATAATTTATGTAATGTTTTTTTTTTCTTTCGACATTCATTAATTAAAACGCTGTTTAGAGCTCAGTGCCATTGTTGTTGTTATTAATGCTCATAAAATTGAGTTGGTAATTTCAGCCGCAGCTCAAATCAAAATTTTTAACAGATGATGTTATGTATTGTAATTCATCATCTCTTTTGTGCTGTAATATTTTTAAAGGAAAATCTTTATTCAGCTCAGTTATTTTTTTCTTCTTAATGTAATTGAAATAGAGCTTCAACCTCTTGTGTTCTTTTCTCATAATACGCACGGATTTTTGAAAGGAAGTTGCTA

Network for GWHGAAEX018806

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03638.14	TCR	94	129	1.30E-09
PF03638.14	TCR	180	215	4.30E-13

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	CPP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	10.700
SRP064423	SRR2545915	Juvenile tuber	8.780
SRP108465	SRR5643513	five period of Gastrodia elata	5.890
	SRR5643514	five period of Gastrodia elata	5.660
	SRR5643515	five period of Gastrodia elata	6.310
	SRR5643524	five period of Gastrodia elata	5.680
	SRR5643525	five period of Gastrodia elata	6.430
	SRR5643528	five period of Gastrodia elata	8.800
	SRR5643658	five period of Gastrodia elata	7.500
	SRR5643659	five period of Gastrodia elata	6.740
	SRR5643660	five period of Gastrodia elata	7.890
	SRR5643661	five period of Gastrodia elata	6.810
	SRR5643662	five period of Gastrodia elata	8.640
	SRR5643663	five period of Gastrodia elata	7.730
	SRR5643664	five period of Gastrodia elata	6.900
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.550
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.930
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.880
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.360
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.700
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	9.470
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.280
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.560
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.630
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.490
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.080
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.080
SRP279888	Gastro	Gastrodia elata tuber	7.58
	Juven	Juvenile tuber	14.76
	Mother_Gastro	Mother tuber of Gastrodia elata	8.09
	Mother_Juven	Mother tuber of Juvenile	13.03