Detail information of GWHGAAEX018812/evm.TU.scaffold_99.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|470140199|ref|XP_004305830.1|7.44E-14PREDICTED: uncharacterized protein LOC101314114 [Fragaria vesca subsp. vesca]
Swissprottr|Q9C8Z9|BH148_ARATH4.00E-10Transcription factor bHLH148
trEMBLtr|M0SKK6|M0SKK6_MUSAM3.00E-14Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P02890_001}
TAIRAT3G065901.00E-09basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000098475851476971-
Transcript Sequence

Network for GWHGAAEX018812

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata85.280
SRR5643514five period of Gastrodia elata19.030
SRR5643515five period of Gastrodia elata53.340
SRR5643524five period of Gastrodia elata15.910
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.540
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.480
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.860
SRR6049655Rhizomagastrodiae_C368-T10_good_118.570
SRR6049656Rhizomagastrodiae_C368-T07_good_144.560
SRR6049657Rhizomagastrodiae_C368-T07_good_121.890
SRR6049658Rhizomagastrodiae_C368-T04_good_117.920
SRR6049659Rhizomagastrodiae_C368-T04_good_113.570
SRR6049660Rhizomagastrodiae_C368-T01_good_185.060
SRR6049661Rhizomagastrodiae_C368-T04_good_131.330
SRR6049662Rhizomagastrodiae_C368-T01_good_141.530
SRR6049663Rhizomagastrodiae_C368-T01_good_152.930
SRR6049664Rhizomagastrodiae_C368-T10_good_116.520
SRR6049665Rhizomagastrodiae_C368-T10_good_116.520
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber6.05
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 1.37