Detail information of GWHGAAEX018817/evm.TU.scaffold_99.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34771.00E-39Putative cytochrome c oxidase, subunit COX19
nrgi|728837957|gb|KHG17400.1|2.64E-42Cytochrome c oxidase assembly COX19 [Gossypium arboreum]
trEMBLtr|A0A061GAH9|A0A061GAH9_THECC8.00E-42Cytochrome c oxidase 19-1 isoform 2 {ECO:0000313|EMBL:EOY26880.1}
TAIRAT1G697501.00E-39cytochrome c oxidase 19-2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000098528263530496-
Transcript Sequence

Network for GWHGAAEX018817

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18183COX19 Thermogenesis map04714

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.540
SRR2545915Juvenile tuber26.730
SRP108465SRR5643513five period of Gastrodia elata15.970
SRR5643514five period of Gastrodia elata18.730
SRR5643515five period of Gastrodia elata17.380
SRR5643524five period of Gastrodia elata16.020
SRR5643525five period of Gastrodia elata13.230
SRR5643528five period of Gastrodia elata19.510
SRR5643658five period of Gastrodia elata24.240
SRR5643659five period of Gastrodia elata21.030
SRR5643660five period of Gastrodia elata20.300
SRR5643661five period of Gastrodia elata17.640
SRR5643662five period of Gastrodia elata21.330
SRR5643663five period of Gastrodia elata18.460
SRR5643664five period of Gastrodia elata17.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.810
SRR6049655Rhizomagastrodiae_C368-T10_good_123.610
SRR6049656Rhizomagastrodiae_C368-T07_good_125.390
SRR6049657Rhizomagastrodiae_C368-T07_good_136.890
SRR6049658Rhizomagastrodiae_C368-T04_good_142.460
SRR6049659Rhizomagastrodiae_C368-T04_good_134.760
SRR6049660Rhizomagastrodiae_C368-T01_good_122.150
SRR6049661Rhizomagastrodiae_C368-T04_good_138.570
SRR6049662Rhizomagastrodiae_C368-T01_good_122.650
SRR6049663Rhizomagastrodiae_C368-T01_good_124.800
SRR6049664Rhizomagastrodiae_C368-T10_good_124.890
SRR6049665Rhizomagastrodiae_C368-T10_good_124.890
SRP279888GastroGastrodia elata tuber 13.38
JuvenJuvenile tuber9.57
Mother_GastroMother tuber of Gastrodia elata 11.72
Mother_JuvenMother tuber of Juvenile 3.37