Gene detail

Detail information of GWHGAAEX018821/evm.TU.scaffold_99.29

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000098	567263	569363	-

Transcript Sequence
>GWHTAAEX018821 ATCAAAAACTAAACCGAAATCGGGCATGGGCCTCGGGGTGATATAGTTAAACGTGACTAGGGTCACGTAATATGATCTGCAATTAAATCTGTTACATTCTTCAACAACACTGTATGTTAGGGATGAGATACACCCAACCAGAGTTAAACCAATCAACCAACACAAGCAAAGCACAACAATTAGAAAAATATTACATAGCTCCCAAATATCTCCCAAAATACTTATGGCACAAACTACAAGATTTTACATGAAAATCAAGAAAATTGCGCAGCCTATCATAAGAGAATTTTATTATCAAAGAGATGGGTACAAAGTTACAGAAAATTTATCAATTACTAGAGAAATGAATGAATTGTTGCCCATTGAGTTTCCTCTTCTTCTTCTCTTCTCACCACAAAGCTCTTTCACATTAATAACCCTAGCTTATCATATAGGCTTTTATATGTGGCTTAAAACCAACCCCAAAAGTACCCCAAACAGCCCCAAGGACACATCTCATTCGGGCGCCCAACGGGCTTGGGCATGCTGTTGGGCATTTTACCTACTGTTGCTAGGCGCGCAGGAGCGCACCTGGCTCGCTGTTTGCTTGTGTAGCCTTGCCCTAGAACTCTCCGGGACCCTATCTGCACATCTTTTGATGATCCAAATAGTCTCTACCTATAACACTGTCCACATCAATATAAGCATCCAATCAAATGCAAACTCACTAGGAGCCAAATAGGGAAGGTGTTTTGATGAATGGTAGCAGAGAGAAACCAATTTCAAATTGCGTTTTCTGATGCCATAGTGAAGAAAGAGAAATAAAAGCCGACATTTTCCACTATTATCAGAATAGGCGATTCTTTTTGTTTTAAATTAAAATTGAGTGTTCTATGACACTTATATCAATAACACTCGATTAGGTGATTGAATTCTAGAGAAAATTTCATGCATAGCACTAAAATCATTCTTATCCACAAATTTAACACCGAATCTCTGTTCATACAGCACAATTATCACCCCCACTCAGCTTCATCGAATTGTCACAAATGAACAAAAAGATGCGACCATATGCTAGCTTTATACGGGTCAAGATTAAGGTGTTCAATATGTTAATGCATAAGTTCAAAGTGCTGTGAAGGTAATATCTCTATACTCAAACACGCTCACTAGTTTCAAATGCTATCAGACCACATGATACAATAAGCTGAATGCGTAGATTTGCTGCTCTTTTAGCCAACTATTCCTACGGATAAGAAGGATGAGCTTTAAAGTAGACCCCTTAATATAATGGGAAGTTTTGTTTTTTACTTTGCTAAATTTAGCTTAGAATAAGTTTGTTGAATTGGAAGAAGAAATGTTCACATGATGCTTTGAATCAACAAAGATGGTGCCAACGAGTTCTAAAACATTTCAGCACAATGCGTTACTAGGCTGGACAGATCCCAGGTGCTCAGGCTCCCCCTTACATGAGGCCTGGGCGCCTGTTAGTAGTCCCAATCCGAATGATGGGCGCCCACGCGGGCCCAGCGCCTGCGGCGATTCAGGCCCAAAGGGATGCGTCCCTGGGGCAGATTTGAGCGGTCATGGAGGGGGTTCATATGATGACAATTTTAGGGCAATCTGGTGTTCGTTTAGTGTGTGAGAGATTGGCAACTATAAGAAACACCATTGTTAATTGATGGTGAAGAGTTTGTGAAATCCTAATTGTATTTTTTCTTCCGTATAGTGAATTTCTTTTCTTCTTTTCTGAAGACGCAAGTGTTTATACTGAACCACATAAATTCTATGTTGTGATTGTACTACTACGATTATTTAATGTTTTCTCTTATTCTTATGTTTGTTTTTCGATCCTAACAAAGTTAATCTAAGATGGTATATATAGCACCATACTTAAGGACTTTCAAAAACCGCATGTATTTATAGATTAGTTATGCTATCTTCCCTAACTAATTAACTGTTGATGATGAGGCAAGAGTGTATAGACGGGATTGGCATGCAACCAAAACCAACATTTAGCATTGATCATAGGTTATGTTTATTTTCATCTAAGGAAATATCAATATAATGATAAATGTCTACAGCAACAACAAGCCTTAATCTCACTAGGTGGGGTTGGCTA

Network for GWHGAAEX018821

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.510
SRP064423	SRR2545915	Juvenile tuber	0.570
SRP108465	SRR5643513	five period of Gastrodia elata	0.670
	SRR5643514	five period of Gastrodia elata	0.920
	SRR5643515	five period of Gastrodia elata	0.800
	SRR5643524	five period of Gastrodia elata	0.870
	SRR5643525	five period of Gastrodia elata	1.210
	SRR5643528	five period of Gastrodia elata	1.390
	SRR5643658	five period of Gastrodia elata	0.960
	SRR5643659	five period of Gastrodia elata	0.730
	SRR5643660	five period of Gastrodia elata	0.660
	SRR5643661	five period of Gastrodia elata	0.640
	SRR5643662	five period of Gastrodia elata	0.660
	SRR5643663	five period of Gastrodia elata	0.510
	SRR5643664	five period of Gastrodia elata	0.990
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.820
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.550
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.170
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.080
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.110
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.950
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.180
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.650
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.840
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.760
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.080
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.080
SRP279888	Gastro	Gastrodia elata tuber	1.06
	Juven	Juvenile tuber	1.97
	Mother_Gastro	Mother tuber of Gastrodia elata	1.88
	Mother_Juven	Mother tuber of Juvenile	2.08