Detail information of GWHGAAEX018822/evm.TU.scaffold_99.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|479131048|ref|YP_005071008.1|8.00E-164pyruvate dehydrogenase E1 alpha subunit [Arthrospira platensis NIES-39]
KOGKOG02250Pyruvate dehydrogenase E1, alpha subunit
nrgi|672198881|ref|XP_008777457.1|0PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic [Phoenix dactylifera]
Swissprottr|O24457|ODPA3_ARATH0Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic (Precursor)
trEMBLtr|A0A0A0KFF3|A0A0A0KFF3_CUCSA0Uncharacterized protein {ECO:0000313|EMBL:KGN46471.1}
TAIRAT1G010900pyruvate dehydrogenase E1 alpha

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000098570200572923-
Transcript Sequence

Network for GWHGAAEX018822

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00676.19E1_dh1274285.60E-81
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00161PDHA, pdhA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620
HIF-1 signaling pathwaymap04066
Glucagon signaling pathwaymap04922

Gene Ontology

GO term OntologyName
GO:0006086Biological Processacetyl-CoA biosynthetic process from pyruvate
GO:0004739Molecular Functionpyruvate dehydrogenase (acetyl-transferring) activity
GO:0016624Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0043231Cellular Componentintracellular membrane-bounded organelle

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.130
SRR2545915Juvenile tuber18.770
SRP108465SRR5643513five period of Gastrodia elata42.200
SRR5643514five period of Gastrodia elata49.650
SRR5643515five period of Gastrodia elata44.340
SRR5643524five period of Gastrodia elata43.390
SRR5643525five period of Gastrodia elata66.220
SRR5643528five period of Gastrodia elata62.200
SRR5643658five period of Gastrodia elata62.580
SRR5643659five period of Gastrodia elata45.260
SRR5643660five period of Gastrodia elata36.480
SRR5643661five period of Gastrodia elata48.840
SRR5643662five period of Gastrodia elata44.040
SRR5643663five period of Gastrodia elata41.540
SRR5643664five period of Gastrodia elata38.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1123.250
SRR6049655Rhizomagastrodiae_C368-T10_good_1118.150
SRR6049656Rhizomagastrodiae_C368-T07_good_1194.300
SRR6049657Rhizomagastrodiae_C368-T07_good_1119.160
SRR6049658Rhizomagastrodiae_C368-T04_good_1118.620
SRR6049659Rhizomagastrodiae_C368-T04_good_177.420
SRR6049660Rhizomagastrodiae_C368-T01_good_1209.200
SRR6049661Rhizomagastrodiae_C368-T04_good_1193.410
SRR6049662Rhizomagastrodiae_C368-T01_good_1211.830
SRR6049663Rhizomagastrodiae_C368-T01_good_1161.370
SRR6049664Rhizomagastrodiae_C368-T10_good_1120.750
SRR6049665Rhizomagastrodiae_C368-T10_good_1120.750
SRP279888GastroGastrodia elata tuber 48.23
JuvenJuvenile tuber130.10
Mother_GastroMother tuber of Gastrodia elata 35.94
Mother_JuvenMother tuber of Juvenile 47.12