Detail information of GWHGAAEX018826/evm.TU.scaffold_99.34
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|116626609|ref|YP_828765.1| | 2.00E-22 | serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076] |
| KOG | KOG0610 | 0 | Putative serine/threonine protein kinase |
| nr | gi|672120092|ref|XP_008783302.1| | 0 | PREDICTED: protein kinase G11A-like [Phoenix dactylifera] |
| Swissprot | tr|Q9LTW5|AGC15_ARATH | 0 | Serine/threonine-protein kinase AGC1-5 {ECO:0000305} |
| trEMBL | tr|A0A068VFM0|A0A068VFM0_COFCA | 0 | Coffea canephora |
| TAIR | AT3G12690 | 0 | AGC kinase 1.5 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000098 | 585268 | 594486 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018826
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 193 | 344 | 3.00E-37 |
| PF00069.24 | Pkinase | 392 | 514 | 1.30E-22 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | AGC_RSK-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 13.100 |
| SRR2545915 | Juvenile tuber | 17.370 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.510 |
| SRR5643514 | five period of Gastrodia elata | 1.030 | |
| SRR5643515 | five period of Gastrodia elata | 3.230 | |
| SRR5643524 | five period of Gastrodia elata | 0.910 | |
| SRR5643525 | five period of Gastrodia elata | 39.230 | |
| SRR5643528 | five period of Gastrodia elata | 24.460 | |
| SRR5643658 | five period of Gastrodia elata | 20.290 | |
| SRR5643659 | five period of Gastrodia elata | 17.550 | |
| SRR5643660 | five period of Gastrodia elata | 29.960 | |
| SRR5643661 | five period of Gastrodia elata | 18.770 | |
| SRR5643662 | five period of Gastrodia elata | 22.110 | |
| SRR5643663 | five period of Gastrodia elata | 27.080 | |
| SRR5643664 | five period of Gastrodia elata | 35.070 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 8.890 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1.640 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 3.190 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.660 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 2.530 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.540 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 1.900 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 2.970 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 3.110 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 2.130 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 2.930 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 2.930 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 26.23 |
| Juven | Juvenile tuber | 14.31 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 13.71 | |
| Mother_Juven | Mother tuber of Juvenile | 10.25 |