Detail information of GWHGAAEX018829/evm.TU.scaffold_99.37


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|337288901|ref|YP_004628373.1|1.00E-111ATP-dependent metalloprotease FtsH [Thermodesulfobacterium geofontis OPF15]
KOGKOG07310AAA+-type ATPase containing the peptidase M41 domain
nrgi|672159698|ref|XP_008799614.1|0PREDICTED: ATP-dependent zinc metalloprotease FtsH [Phoenix dactylifera]
Swissprottr|O78516|FTSH_GUITH1.00E-107ATP-dependent zinc metalloprotease FtsH {ECO:0000255|HAMAP-Rule:MF_01458}
trEMBLtr|M0SJH7|M0SJH7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P31630_001}
TAIRAT4G239400FtsH extracellular protease family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000098635178674895+
Transcript Sequence

Network for GWHGAAEX018829

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00004.28AAA4636027.70E-41
PF01434.17Peptidase_M416668924.80E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0005524Molecular FunctionATP binding
GO:0004222Molecular Functionmetalloendopeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.750
SRR2545915Juvenile tuber9.780
SRP108465SRR5643513five period of Gastrodia elata11.060
SRR5643514five period of Gastrodia elata11.610
SRR5643515five period of Gastrodia elata10.250
SRR5643524five period of Gastrodia elata11.920
SRR5643525five period of Gastrodia elata12.630
SRR5643528five period of Gastrodia elata13.820
SRR5643658five period of Gastrodia elata12.360
SRR5643659five period of Gastrodia elata8.020
SRR5643660five period of Gastrodia elata8.530
SRR5643661five period of Gastrodia elata8.490
SRR5643662five period of Gastrodia elata6.260
SRR5643663five period of Gastrodia elata7.160
SRR5643664five period of Gastrodia elata6.490
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.300
SRR6049655Rhizomagastrodiae_C368-T10_good_113.260
SRR6049656Rhizomagastrodiae_C368-T07_good_113.210
SRR6049657Rhizomagastrodiae_C368-T07_good_111.890
SRR6049658Rhizomagastrodiae_C368-T04_good_114.020
SRR6049659Rhizomagastrodiae_C368-T04_good_113.460
SRR6049660Rhizomagastrodiae_C368-T01_good_115.100
SRR6049661Rhizomagastrodiae_C368-T04_good_115.430
SRR6049662Rhizomagastrodiae_C368-T01_good_120.230
SRR6049663Rhizomagastrodiae_C368-T01_good_117.110
SRR6049664Rhizomagastrodiae_C368-T10_good_115.190
SRR6049665Rhizomagastrodiae_C368-T10_good_115.190
SRP279888GastroGastrodia elata tuber 9.29
JuvenJuvenile tuber9.59
Mother_GastroMother tuber of Gastrodia elata 14.58
Mother_JuvenMother tuber of Juvenile 9.31