Detail information of GWHGAAEX018830/evm.TU.scaffold_99.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG27122.00E-52Transcriptional coactivator
nrgi|720033838|ref|XP_010266551.1|6.66E-65PREDICTED: RNA polymerase II transcriptional coactivator KELP [Nelumbo nucifera]
Swissprottr|O65155|KELP_ARATH6.00E-53RNA polymerase II transcriptional coactivator KELP
trEMBLtr|F6HU32|F6HU32_VITVI2.00E-57Putative uncharacterized protein {ECO:0000313|EMBL:CCB58255.1}
TAIRAT4G109202.00E-52transcriptional coactivator p15 (PC4) family protein (KELP)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000098675385681015+
Transcript Sequence

Network for GWHGAAEX018830

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08766.10DEK_C7595.50E-11
PF02229.15PC41121602.50E-23
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyCoactivator p15

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms37.330
SRR2545915Juvenile tuber41.060
SRP108465SRR5643513five period of Gastrodia elata48.390
SRR5643514five period of Gastrodia elata51.830
SRR5643515five period of Gastrodia elata48.760
SRR5643524five period of Gastrodia elata51.150
SRR5643525five period of Gastrodia elata64.320
SRR5643528five period of Gastrodia elata57.200
SRR5643658five period of Gastrodia elata61.660
SRR5643659five period of Gastrodia elata41.210
SRR5643660five period of Gastrodia elata34.510
SRR5643661five period of Gastrodia elata42.170
SRR5643662five period of Gastrodia elata38.790
SRR5643663five period of Gastrodia elata44.230
SRR5643664five period of Gastrodia elata42.900
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.720
SRR6049655Rhizomagastrodiae_C368-T10_good_120.900
SRR6049656Rhizomagastrodiae_C368-T07_good_135.340
SRR6049657Rhizomagastrodiae_C368-T07_good_128.830
SRR6049658Rhizomagastrodiae_C368-T04_good_130.040
SRR6049659Rhizomagastrodiae_C368-T04_good_134.950
SRR6049660Rhizomagastrodiae_C368-T01_good_132.980
SRR6049661Rhizomagastrodiae_C368-T04_good_129.740
SRR6049662Rhizomagastrodiae_C368-T01_good_136.640
SRR6049663Rhizomagastrodiae_C368-T01_good_136.710
SRR6049664Rhizomagastrodiae_C368-T10_good_137.500
SRR6049665Rhizomagastrodiae_C368-T10_good_137.500
SRP279888GastroGastrodia elata tuber 40.41
JuvenJuvenile tuber64.46
Mother_GastroMother tuber of Gastrodia elata 55.15
Mother_JuvenMother tuber of Juvenile 50.66