Gene detail

Detail information of GWHGAAEX018834/evm.TU.scaffold_99.43

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|694346448\|ref\|XP_009357317.1\|	1.93E-139	PREDICTED: golgin subfamily A member 6-like protein 22 [Pyrus x bretschneideri]
trEMBL	tr\|E5GBA4\|E5GBA4_CUCME	2.00E-131	Putative uncharacterized protein {ECO:0000313\|EMBL:ADN33746.1}
TAIR	AT5G53020	2.00E-36	Ribonuclease P protein subunit P38-related

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000098	725174	729427	+

Transcript Sequence
>GWHTAAEX018834 CTAGCATAATTTAGATGATTCTGAAAAGCATGCCTTAAGAGATACAGCTGGAAGGGATTAGCTTTCGCTCTTTCTTGCTCGTCCTCCGCTTTTTCATTGAGCTGCACCCTACAACGGGAATCTCTGCTGCGGGCGATGTTTACTGCTTAAACGTCTCTTCTATTTGATTTTAAGAAAGAAAGCAGAAAGTATTTAAGCGAAAACTATTGATTAAATTATTGGAAGCGGGTAAACAAAAAGTTGATCACATTCTTTAATCCCTCTTTGAACTTTCTCCCATTTTCTAGCCCTATTTACTGTTTCATTCCTGCTTCGTTTTTTATAGAAAGAAATTCGAGGTGAATTCCTTGCGAACAGAAGCTCTTCATAATTCTGGCAGTTCTCTGTTACCTTTTAGCCACAAACTAATTTAAAATTGATTATAAAATCGTTATGTCTAAAGTCGTCTGGTTTTGTTCCGACTCCATTCTCTACTTCTTTCTTCCCCCACCAGTTAAAGAGGTTGGAAGAACACAAAAAATAGAGATTCGGGGTCTTCTGCTCTCACTGAAATCATTGGTCAATAGTTCACACACTTTTCAAGCCACCGCTGGCGTGCTTACAGAGAAATTAAGGGTGCTCTTCCTTCTGAACAGAAATGCTAGAAGAAGAAGAAGAAGAAGAAGAAGATTCAATGTATCCGATGTACTTCGGTGTTTCTTGTGCTTTGGTTGCACTTGAGCTCCTTTCCGCCATGGAAGAGCCAAATGCAGAGCTTAGCCAGCGAAAATTCTCTGTTGAAGAGCTGATGCTTCGAGGAAGCGCGCAGCTTTTAGGCTTAATGCTTGAAAAAGCGCAAAGAAGGCATGAATATCTGCAAGAGAAGGAGGAAAAGACAAATTTGGAAGTCATGAAGTTGAGGCTTATTCGCGCAGAGGATGCCAAGGCAAACGAGAAGGTCGTGTCTATCTTCTCCGGCCGCGAGCAGGGCTGGAAAACAGAAAGGAGGCGCCTTTTGAATCAGATCCACACACTTTCTTGCGAATTGTCCCTTTTAAAGTTAAAGAATGAAGAAATAGTTTCTGCCCTGAAGAAGAGAGTTTCGGAGGAGCAGAAGGCGCGAATGATCGAAGATGACGTTTTTGAAAAAGTGGCTAAGATGAGAGCGGATTTGGAGGAGAAGTTTGGAGAGGCGCAGAAGGCCGTGGAGGAATTGAAGGAGAAGTCAAGCAAAGAAGCGCAAGATCACATCTTGTACGTCAGAAAGCATAAAGCAGCCTTGACAGAGCATATTTCTAAGCAAAGGCAGATAGAAGCAGAGGCGGCGCGTTTACTTCTCCAAGTCGATGCTGTAAAATTAGAGCTTGATGAAGTTTTTGAACAAAAGGAAGAAGCCTTAGCCATGGTGGAGAAGCTTTCCGAGGAGTTCCTTCGAGTTCAGAAAGACGCGGAGCAGAAAGGGATGATTGTTTCAGCCATGCTCAGGAAGGCACAGCACGATACAGCTGAAAAGCAGGAGCTTTTGAAGGAGGTGAAGTTAACGAGAGCCAAGAATAAGCAATCAGAGCTTGAGGCTGAGAGATGGAAGACTCTGTGGGAAGACAAAAGGAGGAAGAAGAAGTTTCCACGCGATCAAGTGCATTCAGCCGATGCCGGAAGCTCAGGGGAAAGAATTGCTGACTTGCAGTCAGGCTGTAGGCTTGGTCTGAGAGCTCGTTTGATTGAATACTTGACGGAGGGAAACAGAGAGCATGAATTTGCGCTAAAAAGGGCAGAAGGTGCGATCAAAGCAGTAAATTTTCAGGTTCAGTACTTGGATGAAAGTGATGAAAATTTTGATACTGCCCAAGAACTTGAAGATTGGGTTCGGCTAGAAACTAAAAAATGCACATCAGTGCTGGAGCAAAGACATTATTCAGAGATACAAGTATTTGCAGAGCAACTGAGAGAAAGAGATGAGAAACTGGAAGCCTTACATTGGCGGCTTCTAAGCGCAGAGCTGGACTCAAAGAGGCTGCAGTCTCACATTGAAGGGCTCGAAGGGAGCCTCTTTCAGCTAAGGGATGAAAATCTGAAGCTGGAAGAGAGATTGTATGGCAAGAGGGTACCTTTAGAAGATCAATCTAATGATTCGTTTCCGTCAATGAATCTTTCTGAGGATCAATCTAATGACGAATTTTCATCAGAGGATCGATTTCCTCCACTAGGAGAGGCACAGCCTTTATTGAAGATGGATATTCAGGCTGTTGGAGTATCCTTCAAGATCAAAAGGCTAAAACAGCAGCTTTTCATACTTGAAAACTTGGCCGTAGACAGGGACAAATCTTCTGATAATTCATCCGTCACTGGCAAAGAGAAGAACGCTGACTTCAAAGGCTTAATGCAAGTGATTTCTCTCCTCAACAAACAACTGAAGAGACATCAATCTCTTGAAGGAAAGATTGATTCCTTGTTCAAAAAAATGCAGCTTGAGAATTCCAGAGAGAAAACAGACATGCTCGAGCAATTTCTTGAAGAGGCCTTTCACTTGCAAAGATTCATGGTAGCAACAGGGCAAAAATTAACGGAGACCCAATCCAAGATAAGCAGCAGCTTTTCTAGTGCTGATGGACAGGATGAATCAGCTGAATTTAATCTGAGGCAGTTCTTAGACGTTGTTAGGACCCTTTTCAAGGAAGTTCAGAGAGGGCTCGAGGTAAGAATTGCTCGAATTATCGGGGACATCGAGGGAACGTTAGCCAGCGATGGCATCCTTAATAGCTGATTGCGCCTTGCTTACCCTGAAGATGGCACAATCTGTAATTCTGGTGTTCTAAGCGAAGGAAATTCCGATCATTCTCTTTTGGTTTCTCCCTCGGATTATGATTGCACTTAGACTTGCTTTAGAAAGCATTATTCAAATCTATCGTTTTTAACAGTATGAGTTTATACATAATTGGGAGCCATTTGTGCTTCTTGCTTGTATTTGATTGTTGTAAAGTACAAAAAATGATTTTCCTATAGAAAGAGTGATTCCAAAAAAATATTTAATCATTTTGATCAGATTGTAGTCATGAAATTGAACAGAAGTGCCTGTTAACTCAGAAGCTCAAAGCAGCGGTTGCAATTATACAAGGAAT

Network for GWHGAAEX018834

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.150
SRP064423	SRR2545915	Juvenile tuber	23.640
SRP108465	SRR5643513	five period of Gastrodia elata	6.620
	SRR5643514	five period of Gastrodia elata	4.430
	SRR5643515	five period of Gastrodia elata	8.900
	SRR5643524	five period of Gastrodia elata	4.420
	SRR5643525	five period of Gastrodia elata	9.740
	SRR5643528	five period of Gastrodia elata	9.960
	SRR5643658	five period of Gastrodia elata	7.180
	SRR5643659	five period of Gastrodia elata	2.400
	SRR5643660	five period of Gastrodia elata	1.080
	SRR5643661	five period of Gastrodia elata	1.860
	SRR5643662	five period of Gastrodia elata	2.310
	SRR5643663	five period of Gastrodia elata	2.790
	SRR5643664	five period of Gastrodia elata	3.500
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.730
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.100
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	11.890
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.100
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	10.010
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.440
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	13.790
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	10.070
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.160
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	18.990
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.550
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.550
SRP279888	Gastro	Gastrodia elata tuber	3.62
	Juven	Juvenile tuber	2.70
	Mother_Gastro	Mother tuber of Gastrodia elata	18.33
	Mother_Juven	Mother tuber of Juvenile	5.60