Detail information of GWHGAAEX018840/evm.TU.scaffold_99.50


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695046023|ref|XP_009410823.1|4.90E-34PREDICTED: regulator of G-protein signaling 3-like isoform X1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q704V3|LOL5_ORYSJ1.00E-28Protein LOL5
trEMBLtr|A0A067JLS4|A0A067JLS4_JATCU5.00E-34Uncharacterized protein {ECO:0000313|EMBL:KDP20965.1}
TAIRAT4G216108.00E-27lsd one like 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000098819850845597-
Transcript Sequence

Network for GWHGAAEX018840

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06943.11zf-LSD11491723.60E-07
PF06943.11zf-LSD11872116.30E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-LSD

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.990
SRR2545915Juvenile tuber16.010
SRP108465SRR5643513five period of Gastrodia elata31.670
SRR5643514five period of Gastrodia elata28.570
SRR5643515five period of Gastrodia elata30.050
SRR5643524five period of Gastrodia elata32.710
SRR5643525five period of Gastrodia elata33.510
SRR5643528five period of Gastrodia elata26.910
SRR5643658five period of Gastrodia elata26.140
SRR5643659five period of Gastrodia elata33.110
SRR5643660five period of Gastrodia elata34.880
SRR5643661five period of Gastrodia elata33.150
SRR5643662five period of Gastrodia elata32.740
SRR5643663five period of Gastrodia elata29.600
SRR5643664five period of Gastrodia elata33.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.000
SRR6049655Rhizomagastrodiae_C368-T10_good_142.590
SRR6049656Rhizomagastrodiae_C368-T07_good_121.540
SRR6049657Rhizomagastrodiae_C368-T07_good_121.680
SRR6049658Rhizomagastrodiae_C368-T04_good_114.590
SRR6049659Rhizomagastrodiae_C368-T04_good_116.110
SRR6049660Rhizomagastrodiae_C368-T01_good_115.100
SRR6049661Rhizomagastrodiae_C368-T04_good_111.410
SRR6049662Rhizomagastrodiae_C368-T01_good_115.560
SRR6049663Rhizomagastrodiae_C368-T01_good_113.520
SRR6049664Rhizomagastrodiae_C368-T10_good_125.710
SRR6049665Rhizomagastrodiae_C368-T10_good_125.710
SRP279888GastroGastrodia elata tuber 26.95
JuvenJuvenile tuber65.09
Mother_GastroMother tuber of Gastrodia elata 28.05
Mother_JuvenMother tuber of Juvenile 51.24