Detail information of GWHGAAEX018844/evm.TU.scaffold_99.54


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743755671|ref|XP_010912702.1|3.43E-157PREDICTED: protein trichome birefringence-like 38 [Elaeis guineensis]
Swissprottr|O22960|TBL37_ARATH2.00E-138Protein trichome birefringence-like 37
trEMBLtr|M0SMC4|M0SMC4_MUSAM1.00E-156Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P09070_001}
TAIRAT1G290502.00E-127TRICHOME BIREFRINGENCE-LIKE 38

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000098878604881707-
Transcript Sequence

Network for GWHGAAEX018844

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14416.5PMR5N30823.50E-23
PF13839.5PC-Esterase853445.80E-81
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms46.420
SRR2545915Juvenile tuber24.840
SRP108465SRR5643513five period of Gastrodia elata62.850
SRR5643514five period of Gastrodia elata42.440
SRR5643515five period of Gastrodia elata38.300
SRR5643524five period of Gastrodia elata41.290
SRR5643525five period of Gastrodia elata19.620
SRR5643528five period of Gastrodia elata11.770
SRR5643658five period of Gastrodia elata15.510
SRR5643659five period of Gastrodia elata47.920
SRR5643660five period of Gastrodia elata45.770
SRR5643661five period of Gastrodia elata44.540
SRR5643662five period of Gastrodia elata33.450
SRR5643663five period of Gastrodia elata42.630
SRR5643664five period of Gastrodia elata50.240
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_138.530
SRR6049655Rhizomagastrodiae_C368-T10_good_160.160
SRR6049656Rhizomagastrodiae_C368-T07_good_138.010
SRR6049657Rhizomagastrodiae_C368-T07_good_148.440
SRR6049658Rhizomagastrodiae_C368-T04_good_126.160
SRR6049659Rhizomagastrodiae_C368-T04_good_124.740
SRR6049660Rhizomagastrodiae_C368-T01_good_129.190
SRR6049661Rhizomagastrodiae_C368-T04_good_120.590
SRR6049662Rhizomagastrodiae_C368-T01_good_122.360
SRR6049663Rhizomagastrodiae_C368-T01_good_121.660
SRR6049664Rhizomagastrodiae_C368-T10_good_145.620
SRR6049665Rhizomagastrodiae_C368-T10_good_145.620
SRP279888GastroGastrodia elata tuber 30.13
JuvenJuvenile tuber102.16
Mother_GastroMother tuber of Gastrodia elata 23.07
Mother_JuvenMother tuber of Juvenile 40.55