Gene detail

Detail information of GWHGAAEX018847/evm.TU.scaffold_99.57

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|297625126\|ref\|YP_003706560.1\|	9.00E-59	cytochrome P450 [Truepera radiovictrix DSM 17093]
KOG	KOG0157	6.00E-180	Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
nr	gi\|672157234\|ref\|XP_008798317.1\|	0	PREDICTED: LOW QUALITY PROTEIN: cytochrome P450 CYP72A219-like [Phoenix dactylifera]
Swissprot	tr\|Q9LUC6\|C7A14_ARATH	2.00E-180	Cytochrome P450 72A14
trEMBL	tr\|M0SJE4\|M0SJE4_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P31300_001}
trEMBL	tr\|M0SJE4\|M0SJE4_MUSAM	9.00E-13	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P31300_001}
TAIR	AT3G14680	6.00E-180	cytochrome P450, family 72, subfamily A, polypeptide 14

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000098	897193	902060	-

Transcript Sequence
>GWHTAAEX018847 AGGCAGCAAGGAAAGTGGCAATGGAGGCATTTGGCTGGTGGTGGTTAGTGGTGGCGGGGACGACGGGCATGCTGGTGTGGGGAGCAAGGCTGGCCACGTTGTTGTGGTGGGGCCCACGGGGACTGGAGCGGTCTCTGCGGGCCCAGGGCCTGCGCGGGAATCGCTACCGGTTTCCCTCCGGCGATCTTGGGGAGGAGGCCCGCCTCCTTCGGGAGGCCCTCGCGAGACCCCTCCCTCTTCTCCAGAAAACCATGCCCAGAGCTTCCCCATTGCTGTACCGAGCCATCACTCAGTATGGTAAATCGAGCATTACATGGTTTGGGCCGGTTCCTAGGGTCACAATCACGAATCCCGATCTGGTCCACGAAATTCTATCTACCAAATTCGGACACTTTGAGAAACCGAAGATCAGCAGCATACGGAAGCTCGTCGTCACCGGGCTCGTGCATTACGAACACAAGAAATGGGCCAAACATAGGAGAATCATCAACCCCGCTTTCCATTTGGAGAAGCTCAAGAACATGCAGCCAGCATTCTCATCTTGCTGCAGTGAAATGATCCGACGGTGGGAGAGATTAGTCGAATCGTCCGGTGCTGAATCGAACGGCAATCACGAGCTGAACGTCTGGGCAGAATTCCAAAATCTGACGGTCGATGTCATCTCGAAGGCAGCGTTTGGCAGCAGCTGTGAAGAAGGAAGGCGTATATTTAAGCTTCAGTCTGAGCAGGCTCAACTCATCTTGAAGTCTACTCATAAACTCTTCACATTAATTCCTGGCTTTTTCAGGTTCTTACCTACTCCAGTAAATAGACGAAGTAAGCAAATTGAGAGAGAGCTTCGATTAATTCTTCGAGGCATGATAGAAAAAAGAGAGGAGGCTGTGAAGATTGGAGAAAAGAATGGTGGTGATCTGCTGAGTTTATTGATTGAATCCAATTTAAATCAATTTGCAAATCATGGAGAATCAAGGAATTGTGGGATGACTACCGAAGATGTTATTGATGAATGTAAGCTCTTTTATTTTGCTGGACAGGAGACCACAAGCTCATTACTTAATTGGACGATTGTTTTATTAAGTATGTTTCCAAGTTGGCAAGAAAAGGCACGAGAAGAAGTTATGCAGGTTTATGGTCAAAATGCACCAGACTTTTATGGCTTGAGTCGATTAAATATTATGAACATGATTCTTCATGAGGTTCTACGATTATACCCACCTGCATCTCATGTGGCTCGAAGTACTTATAAGAGCATGGAATTAGGTAAGATAACTTATCCAAAAGGTGTGATGCTTTGTATTCCTATAATCTTCATTCACCGTGATCCTGAAATTTGGGGAGAAGATGCTGATGAATTCAAGCCTGAAAGATTTGCTAAAGGAGTATCAAATGCAACAAAGAACAATCAAATGGCATTTTTCCCATTTGGTTGGGGTCCTCGCATTTGCATTGGTCAAAACTTCGCAATGTTTGAAGCAAAGATGTGCTTGAGTATGATTCTTCAACGTTTTTCGTTCAAGCTTTCGCCATCCTATATTCATGCTCCATACATGGTCATAACACTTCAACCACAGCATGGTACTCAAGTGGTAATACGTAGAATATGACAAATTCTTACATTACGCATGCATCATAAATTATATTTAAGAGAATGCGTAGAATTTGCATTTATGCTTAAAGCAGCATCTTTGAATTGATGTATCTATCACAATTAAAAAGCATTTGTGCTCAAGAAGATTGAGTGCTGCCAAATAATCTTGTGGCAAAGCATGCGAAGTTAACTATTTTTAAGTTTGAATTGTTGTTAAGCTCGATTACTACTGCAAAATATTACAATCCTTGGAATGAAAAATTCCACTATTAAATTGAGTAATAAAAAATATTATTGTGTGAG

Network for GWHGAAEX018847

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module5

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	91	502	2.60E-84

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP72A14

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0020037	Molecular Function	heme binding
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506	Molecular Function	iron ion binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.160
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	17.750
	SRR5643514	five period of Gastrodia elata	22.990
	SRR5643515	five period of Gastrodia elata	12.790
	SRR5643524	five period of Gastrodia elata	17.980
	SRR5643525	five period of Gastrodia elata	0.000
	SRR5643528	five period of Gastrodia elata	0.080
	SRR5643658	five period of Gastrodia elata	0.030
	SRR5643659	five period of Gastrodia elata	0.030
	SRR5643660	five period of Gastrodia elata	0.040
	SRR5643661	five period of Gastrodia elata	0.000
	SRR5643662	five period of Gastrodia elata	0.000
	SRR5643663	five period of Gastrodia elata	0.000
	SRR5643664	five period of Gastrodia elata	0.030
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.830
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.120
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	8.000
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.950
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.380
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.660
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.390
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.220
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.120
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.300
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.820
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.820
SRP279888	Gastro	Gastrodia elata tuber	0.00
	Juven	Juvenile tuber	0.00
	Mother_Gastro	Mother tuber of Gastrodia elata	0.18
	Mother_Juven	Mother tuber of Juvenile	0.12