Gene detail

Detail information of GWHGAAEX018858/evm.TU.scaffold_99.69

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|291614838\|ref\|YP_003524995.1\|	9.00E-23	carboxylesterase [Sideroxydans lithotrophicus ES-1]
KOG	KOG2112	1.00E-116	Lysophospholipase
nr	gi\|743798467\|ref\|XP_010925247.1\|	3.87E-147	PREDICTED: acyl-protein thioesterase 2 isoform X2 [Elaeis guineensis]
trEMBL	tr\|M0S9G0\|M0S9G0_MUSAM	1.00E-143	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P19690_001}
TAIR	AT5G20060	1.00E-116	alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000098	1149492	1166077	-

Transcript Sequence
>GWHTAAEX018858 AAGAAATGTGTGAGAAGTCGTAGGCCGCAGCATTTTCCCGGTTAATGGCAATGGCATCTCGCCGCACAGCCGCCGCGCGGCCACGAGTGATCCGAGATGGACGGTCAAGCGCGGCGCATATCCGGAAGCTTGTACGCAACTCTCCTCCAATGGCAGGTTCGCTTGCCACTGATCCGACCTCTCCATTAGTATACCAATAGCCATGCCATTAAACAAATCCCTTTCCCTGAAAATGCTCATAAAAAGTGAATCTTTAATGGTTCGCCGTTAAAAATATTCTGCATTTTGCTATTTGTTCTCCCTCCACTGCCGAAACGCATCGATTCCTGAGTGTAAAACCCTAAGCGCACCATTTCGCCTTTCCGCCGATTCTCCCTTTTCAGTTCTATGAGTCCGTGGCTGGCGCATGGTTGCGTATCTGCAATGCTGATGGATTCCCTGCGCCGTGTTGATGTTTCCAGGTCTTTTCTATCTACAGCCTGTTATACGTGGAGAACCGGCGCCAAAGAAGGTCTGGTTTTGAGATTGAGATTCTGATATTAGTTGGTGAAAATGAGCTATGGGAGCAGCTCTCTTAGTTCTGGGGGGAGGAGTAATAGGAGGGCTTTTGAGTTTGGGAGGACACATGTGGTTAAACCGAAGGGGAGACACCTGGCCACTATAGTCTGGCTCCATGGCCTTGGGGACAATGGTGCAAGCTGGTCCCAACTCTTAGAAACGCTTCCTCTTTCTAATATTAAATGGATTTGTCCAACAGCACCTACTAGACCCGTTGCAGCTTTTGGAGGATTCCCTTGCACTGCATGGTTTGATGTAGGAGAATTTTCTGAAAATGGCCTTGATGATGTAGAAGGAACGGATGCTTCAGCTACACATGTTGCAAACTTTCTGTCAACTGAACCTTTTGGAATTAAACTCGGTATTGGGGGTTTCAATATTGGTGCTTCTACTGCCCTTTACTCTGCAGTTTGCTGTGCTTATGGGAGATTTGGAAGTGGCGTTCTTTACCCAGTTAACCTCAGTACAGTGGTCAGCCTGAGTGGCTGGCTTCCATGCTCTAGGAGCTTGAAGAATAAAGTTGAGAGTTCACAAGATTTTGCAAGAAGGGCTGCTTCCTTGCAACTACTGCTTTGTCATGGCAAAGCTGACGATGTTGTGCTCTATAAGCATGGACAGAAGTCTGCTGATGTTTTAAGTTCATATGCTTTCCGAAATACTACATTTAAAACTTATAATGGGCTTGGCCATTATACTGTTCCAGAAGAAATGGAGGATGTCTGCAAATGGCTAACTGCGAGGCTGGAACTTGATGGATCCCGTTAATATGCTTTTTAAAATATAATTAATTTGAATGGATGGTTATGTTAGATCTATAGCATTGGCTGTGATATTTTCTAGGATGTTTTTCCATATTCTGGTTTCAGTTTGTGCATCATCATTTCTTTGTAAATAGTTGTCAGTATCTATTATAATTTGAAGGTGTTGATGTATATCTCTAAGAACATATGGGTGTGTGTTGCTTTGTTCAAGGGGTGTTATTATGTTTTTATTAAAATGATCTGTTGGGTAATTATTATATATAATGATTCACATAAAAGCTTCATGCACTAATTTTTGTTTAATTTGAATATTTAT

Network for GWHGAAEX018858

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02230.15	Abhydrolase_2	25	247	4.40E-36

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K06130	LYPLA2	Glycerophospholipid metabolism	map00564

Gene Ontology

GO term	Ontology	Name
GO:0016787	Molecular Function	hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.850
SRP064423	SRR2545915	Juvenile tuber	3.560
SRP108465	SRR5643513	five period of Gastrodia elata	10.860
	SRR5643514	five period of Gastrodia elata	6.590
	SRR5643515	five period of Gastrodia elata	10.300
	SRR5643524	five period of Gastrodia elata	7.940
	SRR5643525	five period of Gastrodia elata	93.580
	SRR5643528	five period of Gastrodia elata	107.730
	SRR5643658	five period of Gastrodia elata	30.950
	SRR5643659	five period of Gastrodia elata	3.120
	SRR5643660	five period of Gastrodia elata	0.490
	SRR5643661	five period of Gastrodia elata	2.970
	SRR5643662	five period of Gastrodia elata	7.450
	SRR5643663	five period of Gastrodia elata	3.110
	SRR5643664	five period of Gastrodia elata	2.990
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.950
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.090
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.990
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.790
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.560
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.940
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.090
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.540
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.620
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.770
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	18.770
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	18.770
SRP279888	Gastro	Gastrodia elata tuber	4.88
	Juven	Juvenile tuber	4.74
	Mother_Gastro	Mother tuber of Gastrodia elata	37.88
	Mother_Juven	Mother tuber of Juvenile	5.15