Detail information of GWHGAAEX018859/evm.TU.scaffold_99.70


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743783525|ref|XP_010921437.1|4.95E-53PREDICTED: transcription factor bHLH147-like [Elaeis guineensis]
Swissprottr|Q9C8Z9|BH148_ARATH4.00E-34Transcription factor bHLH148
trEMBLtr|U5G9S2|U5G9S2_POPTR2.00E-40Uncharacterized protein {ECO:0000313|EMBL:ERP60170.1}
TAIRAT3G065901.00E-33basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009811835121185716-
Transcript Sequence

Network for GWHGAAEX018859

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.870
SRR2545915Juvenile tuber10.200
SRP108465SRR5643513five period of Gastrodia elata15.480
SRR5643514five period of Gastrodia elata16.240
SRR5643515five period of Gastrodia elata22.290
SRR5643524five period of Gastrodia elata14.820
SRR5643525five period of Gastrodia elata28.730
SRR5643528five period of Gastrodia elata18.430
SRR5643658five period of Gastrodia elata27.860
SRR5643659five period of Gastrodia elata22.770
SRR5643660five period of Gastrodia elata20.800
SRR5643661five period of Gastrodia elata22.440
SRR5643662five period of Gastrodia elata11.700
SRR5643663five period of Gastrodia elata9.610
SRR5643664five period of Gastrodia elata9.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.050
SRR6049655Rhizomagastrodiae_C368-T10_good_139.090
SRR6049656Rhizomagastrodiae_C368-T07_good_128.580
SRR6049657Rhizomagastrodiae_C368-T07_good_131.690
SRR6049658Rhizomagastrodiae_C368-T04_good_132.320
SRR6049659Rhizomagastrodiae_C368-T04_good_131.160
SRR6049660Rhizomagastrodiae_C368-T01_good_126.070
SRR6049661Rhizomagastrodiae_C368-T04_good_128.780
SRR6049662Rhizomagastrodiae_C368-T01_good_123.580
SRR6049663Rhizomagastrodiae_C368-T01_good_119.140
SRR6049664Rhizomagastrodiae_C368-T10_good_127.160
SRR6049665Rhizomagastrodiae_C368-T10_good_127.160
SRP279888GastroGastrodia elata tuber 7.28
JuvenJuvenile tuber14.12
Mother_GastroMother tuber of Gastrodia elata 28.12
Mother_JuvenMother tuber of Juvenile 12.90