Gene detail

Detail information of GWHGAAEX018862/evm.TU.scaffold_99.73

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|339483183\|ref\|YP_004694969.1\|	4.00E-10	Chaperone protein dnaJ [Nitrosomonas sp. Is79A3]
KOG	KOG0720	0	Molecular chaperone (DnaJ superfamily)
nr	gi\|672163763\|ref\|XP_008801737.1\|	0	PREDICTED: uncharacterized protein LOC103715768 isoform X1 [Phoenix dactylifera]
Swissprot	tr\|Q9LZK5\|DNJ19_ARATH	3.00E-08	DnaJ protein ERDJ3B (Precursor)
trEMBL	tr\|M5XKF5\|M5XKF5_PRUPE	0	Uncharacterized protein {ECO:0000313\|EMBL:EMJ26424.1}
TAIR	AT5G49580	0	Chaperone DnaJ-domain superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000098	1264407	1291591	-

Transcript Sequence
>GWHTAAEX018862 GTGCAATTTTCCAATGGATAGTACATTTTAATATGATTTTTCTTACTGGTAGCTAATTTGCTCTCAGCAATTTGTGTTATAAAGATTACATATAAGATGGCTCGGAAAGGAAGCCAACAGAGAAGTAGTCTTGATCGCAAGGCAACAAAACTACAAAATGTAATTCCAGGTTCATTGGATACTTCTTTTATTGAGAATAAGGAAAAGAAAGGAAAAAGTGACCAGAGGTTTACTTATTGTGATCACTCAAATAATGACGTATCTTTCAAATCAAGCCATCCTCTTACTGAGCAATCCATTAATAGTGATATTACAGGAGCAGTTAGTAGTTGCAAGCAAAGAATTTCTGATGTTTCTGTTAGGGAGCAAGCAAAGTCAGGCATAATAGAGGGATCAGATCGAACAAAAATTATATCTGATAAAGCAGTAGACGTTACAGAAAATGAGTTATCAGATGCACCTAAGCCAAAATTAACTAATGGAGTAATGCTTGATGTTAATTGCAATCTTAGCAACAACTTGTTTGGTAAATTTTTAGTAAGAAGCGCTGCAGCTATGATTACAACTTTGGATGCTATTAGTGGTTGGGGTTTTAGACCGGCTTCATATGTCCTGAAAGTTACCGGTGGATGGATTGAGCAACAAAAGCCTCGGGTCTCTCGTTTCATAAGCTATGTGCATCATACTTATGATAATGGCATTGCAAAAATTAAGATCGTGTTCCCTGTGATTTTTGGATGGGTTTTGCACTTTGGCAAATTGGTGCTTTTTCTTTTTGCGATTTGGCTGGGCTGCAGTATTAGGGGTCTTAATTCATTATTTCATTTGGGTACAACATCACTATTTACCATTCTCTGGTGCAGCCTACTTTCAATTATTGCTATAGTTGGATTCATAAAATTGCTTTTTACGATGGTCATTGCCTTTCTGCTGTTGATTTTTATTGGTATGGTTCCTGCAATTTTGCTGCTCGCCATTTCTGCAACTGTAGTTTTGTGGCTTTACGGCAGTTTTTGGATGACAAGCTTCGTCACTTTTCTTGGAGGTGCCTCTTTTTGTTTGCGTCATGAGAGAATTGCACTTTTTGTGACTACTCTGTATTCTCTGCACTGTGCAAGAACTTATACTGGCTGGCTTGGCTTATTTCTGGGTCTTAATCTGTCTTTTATCTCTAGCGATGTTCTAGTTTATGTCTTAAAGAATAATTCTAATGAATATAGGGGACCTGATGATTGTAGCCGTGAGATTCCTTCAACCAGCGGGAGGGAGGCAGAGCTAACATCTGATGATGAAGTTTCTCGGTTGTTGAGCAGTAGTGATCACTATACAGCATTGGGCTTCAATCGGCTTGAAAATGTTGATGTTTCTGTGCTCAAAAGGGAGTACCGGAAGAGGGCAATGCTAGTTCATCCTGACAAGAACATGGGCAATGAAAAAGCTGTAGAAGCCTTTAAAAAGCTTCAAAATGCTTATGAAGTTTTGCTAGATTCCATCAAGAGGAAGAACTATGATGATGACCTAAGGAGGGAGGACCTTTTGAATTATATTAGAAGCTTCCAGGCTTCAGCACACAAGAATGAAAGGCATGGAATCTTCAGTTCTGAATCCACTAATATTGAGGCTGAAGATAGTGGCTCTTATGGAGAATCAAGAAAAATTTTCTGCAAGAAATGCGGCAACTTCCATATCTGGACTCCTATTGAAAGATTAAAATCTCAAGCAAGATGGTGTCAGGATTGTAATGATTTCCATCCATCTAAAGATGGTGATGGGTGGCTTGAACAGTCGAGCATTCCCATTCTTTTTGGATTAATGCAGAAGGTTGATACCCCACGTGCATATGTTTGTTCGGAAAGCAGGATATATAATGCAACCCAATGGCTCAATTGCCAGGGAATTAGAGTTCCTGCAAACACACACAAGCCCAGCTTCCATGTAAACATTAGCTTAAGCAACTCTAAACATGGAGGCAATCCTAAAGCCTCCACTAGTTCTCCTCATAGAGACGGCGGCGGCGACATGACCGAGGAAGATTTGTATGAGTGGCTGCAGAATGCGATGAATTCAGGCAGATTTGAGCCTGATTTCGCCCCCAAGGAGGGCGCTTCAAGCAGCAACAGCGGTTCCAGAAGTAGTGGAGGCTCTTGCAGCAAAAAGAAGAGGAAGGGGAAAAGGCAGTGGTAGGCTTCCCTTAAGCGGATATTGTAAGTGTTTTTCTGCGATGAAAATTCCTGCAAGGTTTCCTACCGTTGTTGGTACTCTTTTGATAAACTATACCTCTTCAATGATAGCATTTGCATTATCTTCCTCTTCATACATATATATATATATATTATATATA

Network for GWHGAAEX018862

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module6

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00226.30	DnaJ	408	472	1.10E-17
PF14901.5	Jiv90	518	615	1.60E-30

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	51.400
SRP064423	SRR2545915	Juvenile tuber	47.900
SRP108465	SRR5643513	five period of Gastrodia elata	28.490
	SRR5643514	five period of Gastrodia elata	26.300
	SRR5643515	five period of Gastrodia elata	22.650
	SRR5643524	five period of Gastrodia elata	24.940
	SRR5643525	five period of Gastrodia elata	31.980
	SRR5643528	five period of Gastrodia elata	25.720
	SRR5643658	five period of Gastrodia elata	37.570
	SRR5643659	five period of Gastrodia elata	26.830
	SRR5643660	five period of Gastrodia elata	27.700
	SRR5643661	five period of Gastrodia elata	25.620
	SRR5643662	five period of Gastrodia elata	23.770
	SRR5643663	five period of Gastrodia elata	29.140
	SRR5643664	five period of Gastrodia elata	23.440
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	60.960
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	39.800
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	53.210
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	85.120
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	93.840
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	120.370
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	79.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	79.700
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	36.810
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	50.340
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	28.690
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	28.690
SRP279888	Gastro	Gastrodia elata tuber	31.61
	Juven	Juvenile tuber	49.51
	Mother_Gastro	Mother tuber of Gastrodia elata	20.34
	Mother_Juven	Mother tuber of Juvenile	25.60