Gene detail

Detail information of GWHGAAEX018870/evm.TU.scaffold_99.82

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|521464512\|ref\|YP_008151634.1\|	2.00E-25	hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
KOG	KOG1187	0	Serine/threonine protein kinase
nr	gi\|695049934\|ref\|XP_009412924.1\|	0	PREDICTED: U-box domain-containing protein 35-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q8S8S7\|PUB34_ARATH	1.00E-130	Serine/threonine-protein kinase
trEMBL	tr\|M0TMW9\|M0TMW9_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P05660_001}
TAIR	AT5G12000	0	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000098	1451224	1455603	-

Transcript Sequence
>GWHTAAEX018870 GCAATGAGCAATGTAGTATTATTACCTGTGCCAAAACAGCTTCTAATTATGCTAACAACTTAGTCGTTAGCTCTGAGCAATGAAAATAACAGCCTTTTTTTAAATGCGGAAGAGGAAACAGCAGTGCAGCAAAGGTCCCAAAGAACAAATAAAGGAATTGAAGAAGATCTCCTGCTCATCTTCTTCATCCCTCGATGTTGGACGGAATCATAACCCAGACGATCGTCGGCGTTGACAAAGACAAGAGCAGTCAGCAAGCCGTCAGGTGGTCCGTAGAAAACCTCCTCTTCAGCAACCACTTCATCACCCTCCTCCATATTCGCCGTCCGTCCGCCAATACCCATTATGGGTTTGCCATGGCGGAGACGACCGATGACGCCGTGAGGGAGCAGTTCGAGGCCGAGATGAACCAGCTTTTCCAGCCTTGCAAAGGTTTCTGCTTGAAGAAAGGGGCGCAGATTAAGGAGGTGGTCGTAGAAGACACGGACGTTTCCAAAGCCATTGTTGAGTATGCAACCCTTCACAGTGTCCACAACATCGTCCTCGGCGTCTCCAGCCGAAATGCTATCACAAGAAGATTCAGGAATCCGGACGTGCCTTCATGCGTGATGAAATCAGCGCCTGATTACTGCACAGTGTACGTAGTATCGAAAGGGAAGCAGGCGCATATTCGATCGTCCAAAGGTCCGCCGCCGTCGGTGAGCACTGCTGTTCAAAGGCAATCTCTGCCGCCCAGCCATCATAAACATCATGATCATCATCATCATGACTCCGATGACTCTGTGAAGAACAGAGCGGCAGCGGTGACAAGAGGAAGCTGGTGGGGGTCCAAAACTCCGCCTCCGGCGCCCCAAATTCCGGAGCGGCGATCCTTCGAGAAGAGCGCTCTGAAGAAGGCGGCGCTGAAGGGGTCGCCCGGTCACGTGCTGCACGATAGCCTCGACATCTACACCCATTCCCAGCGCGCCTCCACCTCACGTGACTCCTTATCGGAGGACTTCGACGCCCAGCGCGACGTGCCCTTCTTCGCCCCCAATATCGCTGATTCTTTCGACATGAGCATGTGCAGCAATCCCGACACGCCGAATCGTTTCGTGGACGCAGAGGTGAACCGCCTGAAGCTCGAGCTGAATCACACCATGGACATGTACAGCACCGCCTGCAAAGAGGCCATCACGTCAAAACAAAAGGCAAAAGAGCTTGAGGAGAGGACAATGGAGGAATCGAGAATGCTGGAGGAGGCGAGGCAGGCGGAGGAAGCGGCTCTGGCGCTGGTGGAAATGGAGAAGGCGAAGTGCAAGGCGGCTATAGAGGCGGCTCAGGCGGCGCAGAGGCTGGCAGAAGTGGAGGCGCGGAGGAGGGTGCAGGCGGAGATGAAGGCGAAGCGGGAGTCGGAGGAGAAGGTCAGGGCTCTCACCGCCCTCGCACATAAAGACCACCGCTACAGGAAATACACGATCGAAGAGATCGAACTCGCCACAGAGTACTTCTCCGAGTCCCTTAAGATTGGCGAAGGAGGCTACGGACCCGTCTACAGGGCTTCCCTCGATCACACCTCTGTGGCCATCAAAGTCCTCCGCCCAGACGCCGCCCAGGGCAGGAAGCAGTTTCTACAAGAGGTGGAGGTGCTGAGCTGCATAAGGCACCCGAACATGGTTCTACTGCTGGGGGCGTGCCCGGAGTACGGTTGCCTGGTCTACGAGCACATGGACAACGGCAGCCTGGAGGACCGTCTGTTCCAGCGCGGCAAAACCCCGCCCATCCCCTGGCCGGTCCGGTTCAAAATAGCCGCTGAGATTGCCACCGGGCTGCTGTTCCTCCACCAGGCTAAACCGGAGCCGCTGGTTCACCGGGACCTGAAGCCGGGAAACATACTTCTGGACCAGAACTACAGGAGCAAGATCAGCGACGTGGGGCTGTCCAGGCTGGTCCCGCCATCTGTGGCCGACAGCGTCACCCAGTACAGAATGACTTCCACGGCGGGAACGTTCTGCTACATCGATCCGGAGTACCAGCAGACGGGGATGCTGGGCACCAAGTCCGACATCTACTCCCTGGGAGTGCTGCTGCTGCAGCTGGTGACCGCCAAGGGGCCCATGGGCCTGACCCACCTGGTCGAGAAGGCGCTGGACCGCGGGACCCTGTCCGAACTGCTAGACCCAGCCGTGCCCGACTGGCCCGACCAAGAAGTCGCAGCCTTCGCCCGCCTCGCACTCAAGTGCACCGAGCTCAGGAAGAAGGACCGCCCCGATCTCGCTGCCGTCATCCTCCCAGAGCTCAACCGCCTCAAGAACCTCGCCCTTGCCGCTTCGAAACCTTAATTGTCTTTCTCCTCCCTATATTTCTCTCATTTTTCGAACTATTCTTTCTTTGTGGTTGTTGTGTATCGAAGGTCAAACCCTTTTTTGTGCTTGTTGTGTGTGCTTTGAGCTACAGTGGCCTATATTTTACTCATTTGATGTCAAATTATGCTGTGTAATATTTTTTTTATATTGTTTAT

Network for GWHGAAEX018870

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00582.25	Usp	10	131	2.60E-09
PF00069.24	Pkinase	434	688	7.10E-39

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_RLCK-IXb

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.810
SRP064423	SRR2545915	Juvenile tuber	0.510
SRP108465	SRR5643513	five period of Gastrodia elata	1.570
	SRR5643514	five period of Gastrodia elata	0.730
	SRR5643515	five period of Gastrodia elata	0.750
	SRR5643524	five period of Gastrodia elata	0.870
	SRR5643525	five period of Gastrodia elata	0.440
	SRR5643528	five period of Gastrodia elata	0.340
	SRR5643658	five period of Gastrodia elata	0.540
	SRR5643659	five period of Gastrodia elata	0.730
	SRR5643660	five period of Gastrodia elata	0.770
	SRR5643661	five period of Gastrodia elata	0.730
	SRR5643662	five period of Gastrodia elata	0.710
	SRR5643663	five period of Gastrodia elata	0.860
	SRR5643664	five period of Gastrodia elata	0.740
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.550
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.810
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.790
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.730
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.130
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.330
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.370
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.270
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.650
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.240
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.680
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.680
SRP279888	Gastro	Gastrodia elata tuber	0.43
	Juven	Juvenile tuber	1.00
	Mother_Gastro	Mother tuber of Gastrodia elata	1.32
	Mother_Juven	Mother tuber of Juvenile	2.17