Detail information of GWHGAAEX018876/evm.TU.scaffold_99.88


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297621203|ref|YP_003709340.1|8.00E-18serine/threonine PP2C protein phosphatase [Waddlia chondrophila WSU 86-1044]
KOGKOG06983.00E-150Serine/threonine protein phosphatase
nrgi|743843836|ref|XP_010938175.1|0PREDICTED: probable protein phosphatase 2C 47 [Elaeis guineensis]
Swissprottr|Q9FYN7|P2C02_ORYSJ4.00E-170Probable protein phosphatase 2C 2
trEMBLtr|I1L7L6|I1L7L6_SOYBN2.00E-178Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G01270.3}
TAIRAT3G622603.00E-150Protein phosphatase 2C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009815437481550607+
Transcript Sequence

Network for GWHGAAEX018876

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00481.20PP2C683213.10E-61
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0043169Molecular Functioncation binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.300
SRR2545915Juvenile tuber20.680
SRP108465SRR5643513five period of Gastrodia elata31.910
SRR5643514five period of Gastrodia elata33.560
SRR5643515five period of Gastrodia elata44.680
SRR5643524five period of Gastrodia elata32.630
SRR5643525five period of Gastrodia elata94.140
SRR5643528five period of Gastrodia elata76.610
SRR5643658five period of Gastrodia elata91.650
SRR5643659five period of Gastrodia elata43.070
SRR5643660five period of Gastrodia elata37.570
SRR5643661five period of Gastrodia elata51.820
SRR5643662five period of Gastrodia elata53.730
SRR5643663five period of Gastrodia elata48.790
SRR5643664five period of Gastrodia elata65.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.430
SRR6049655Rhizomagastrodiae_C368-T10_good_138.930
SRR6049656Rhizomagastrodiae_C368-T07_good_143.380
SRR6049657Rhizomagastrodiae_C368-T07_good_136.270
SRR6049658Rhizomagastrodiae_C368-T04_good_142.970
SRR6049659Rhizomagastrodiae_C368-T04_good_149.720
SRR6049660Rhizomagastrodiae_C368-T01_good_139.730
SRR6049661Rhizomagastrodiae_C368-T04_good_140.660
SRR6049662Rhizomagastrodiae_C368-T01_good_136.580
SRR6049663Rhizomagastrodiae_C368-T01_good_143.930
SRR6049664Rhizomagastrodiae_C368-T10_good_148.090
SRR6049665Rhizomagastrodiae_C368-T10_good_148.090
SRP279888GastroGastrodia elata tuber 50.62
JuvenJuvenile tuber31.78
Mother_GastroMother tuber of Gastrodia elata 87.92
Mother_JuvenMother tuber of Juvenile 67.79