Detail information of GWHGAAEX018881/evm.TU.scaffold_99.93


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|186682042|ref|YP_001865238.1|2.00E-14neutral invertase [Nostoc punctiforme PCC 73102]
nrgi|565341655|ref|XP_006337994.1|6.54E-20PREDICTED: alkaline/neutral invertase CINV2-like [Solanum tuberosum]
Swissprottr|Q9FXA8|INVA_ARATH2.00E-20Alkaline/neutral invertase A, mitochondrial {ECO:0000305} (Precursor)
trEMBLtr|M1B031|M1B031_SOLTU9.00E-22Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400034055}
TAIRAT1G565606.00E-20Plant neutral invertase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009816189701619817-
Transcript Sequence

Network for GWHGAAEX018881

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12899.6Glyco_hydro_1001221741.50E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0033926Molecular Functionglycopeptide alpha-N-acetylgalactosaminidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.710
SRR2545915Juvenile tuber0.930
SRP108465SRR5643513five period of Gastrodia elata1.020
SRR5643514five period of Gastrodia elata0.860
SRR5643515five period of Gastrodia elata0.480
SRR5643524five period of Gastrodia elata0.630
SRR5643525five period of Gastrodia elata1.680
SRR5643528five period of Gastrodia elata1.420
SRR5643658five period of Gastrodia elata0.970
SRR5643659five period of Gastrodia elata0.620
SRR5643660five period of Gastrodia elata1.590
SRR5643661five period of Gastrodia elata0.920
SRR5643662five period of Gastrodia elata1.490
SRR5643663five period of Gastrodia elata0.960
SRR5643664five period of Gastrodia elata1.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.350
SRR6049655Rhizomagastrodiae_C368-T10_good_12.570
SRR6049656Rhizomagastrodiae_C368-T07_good_10.100
SRR6049657Rhizomagastrodiae_C368-T07_good_10.710
SRR6049658Rhizomagastrodiae_C368-T04_good_10.230
SRR6049659Rhizomagastrodiae_C368-T04_good_10.530
SRR6049660Rhizomagastrodiae_C368-T01_good_10.490
SRR6049661Rhizomagastrodiae_C368-T04_good_10.120
SRR6049662Rhizomagastrodiae_C368-T01_good_10.180
SRR6049663Rhizomagastrodiae_C368-T01_good_10.180
SRR6049664Rhizomagastrodiae_C368-T10_good_10.080
SRR6049665Rhizomagastrodiae_C368-T10_good_10.080
SRP279888GastroGastrodia elata tuber 1.29
JuvenJuvenile tuber0.61
Mother_GastroMother tuber of Gastrodia elata 1.30
Mother_JuvenMother tuber of Juvenile 2.48