Detail information of GWHGAAEX018894/evm.TU.scaffold_99.106


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34332.00E-47Protein involved in meiotic recombination/predicted coiled-coil protein
nrgi|695055147|ref|XP_009415736.1|2.08E-117PREDICTED: meiotic nuclear division protein 1 homolog isoform X1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q8GYD2|MND1_ARATH3.00E-105Meiotic nuclear division protein 1 homolog
trEMBLtr|I1QRU9|I1QRU9_ORYGL6.00E-116Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA09G0177800.1}
TAIRHS141497692.00E-47Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009817830731805549-
Transcript Sequence

Network for GWHGAAEX018894

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03962.14Mnd1161948.90E-57
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007131Biological Processreciprocal meiotic recombination
GO:0003690Molecular Functiondouble-stranded DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.940
SRR2545915Juvenile tuber25.890
SRP108465SRR5643513five period of Gastrodia elata21.720
SRR5643514five period of Gastrodia elata25.000
SRR5643515five period of Gastrodia elata22.600
SRR5643524five period of Gastrodia elata24.710
SRR5643525five period of Gastrodia elata9.330
SRR5643528five period of Gastrodia elata6.920
SRR5643658five period of Gastrodia elata8.300
SRR5643659five period of Gastrodia elata19.780
SRR5643660five period of Gastrodia elata16.930
SRR5643661five period of Gastrodia elata18.360
SRR5643662five period of Gastrodia elata12.670
SRR5643663five period of Gastrodia elata19.520
SRR5643664five period of Gastrodia elata15.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.270
SRR6049655Rhizomagastrodiae_C368-T10_good_122.640
SRR6049656Rhizomagastrodiae_C368-T07_good_124.580
SRR6049657Rhizomagastrodiae_C368-T07_good_121.630
SRR6049658Rhizomagastrodiae_C368-T04_good_118.980
SRR6049659Rhizomagastrodiae_C368-T04_good_117.850
SRR6049660Rhizomagastrodiae_C368-T01_good_122.950
SRR6049661Rhizomagastrodiae_C368-T04_good_118.890
SRR6049662Rhizomagastrodiae_C368-T01_good_123.320
SRR6049663Rhizomagastrodiae_C368-T01_good_124.460
SRR6049664Rhizomagastrodiae_C368-T10_good_117.400
SRR6049665Rhizomagastrodiae_C368-T10_good_117.400
SRP279888GastroGastrodia elata tuber 20.54
JuvenJuvenile tuber25.42
Mother_GastroMother tuber of Gastrodia elata 9.57
Mother_JuvenMother tuber of Juvenile 16.77