Detail information of GWHGAAEX018899/evm.TU.scaffold_99.112


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34545.00E-10U1 snRNP-specific protein C
nrgi|695077942|ref|XP_009386340.1|1.42E-26PREDICTED: zinc finger CCCH domain-containing protein 3 [Musa acuminata subsp. malaccensis]
Swissprottr|Q0JP11|C3H3_ORYSJ5.00E-24Zinc finger CCCH domain-containing protein 3
trEMBLtr|M0U7G9|M0U7G9_MUSAM5.00E-27Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP08590_001}
TAIRHS95068635.00E-10Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009819168081930586-
Transcript Sequence

Network for GWHGAAEX018899

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06220.11zf-U15376.40E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270Molecular Functionzinc ion binding
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.740
SRR2545915Juvenile tuber4.340
SRP108465SRR5643513five period of Gastrodia elata5.930
SRR5643514five period of Gastrodia elata10.340
SRR5643515five period of Gastrodia elata5.810
SRR5643524five period of Gastrodia elata11.890
SRR5643525five period of Gastrodia elata22.980
SRR5643528five period of Gastrodia elata13.840
SRR5643658five period of Gastrodia elata14.540
SRR5643659five period of Gastrodia elata4.740
SRR5643660five period of Gastrodia elata9.380
SRR5643661five period of Gastrodia elata5.300
SRR5643662five period of Gastrodia elata6.020
SRR5643663five period of Gastrodia elata5.140
SRR5643664five period of Gastrodia elata6.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.430
SRR6049655Rhizomagastrodiae_C368-T10_good_111.460
SRR6049656Rhizomagastrodiae_C368-T07_good_19.360
SRR6049657Rhizomagastrodiae_C368-T07_good_16.960
SRR6049658Rhizomagastrodiae_C368-T04_good_15.730
SRR6049659Rhizomagastrodiae_C368-T04_good_13.560
SRR6049660Rhizomagastrodiae_C368-T01_good_15.390
SRR6049661Rhizomagastrodiae_C368-T04_good_13.300
SRR6049662Rhizomagastrodiae_C368-T01_good_15.260
SRR6049663Rhizomagastrodiae_C368-T01_good_14.620
SRR6049664Rhizomagastrodiae_C368-T10_good_113.190
SRR6049665Rhizomagastrodiae_C368-T10_good_113.190
SRP279888GastroGastrodia elata tuber 12.06
JuvenJuvenile tuber20.91
Mother_GastroMother tuber of Gastrodia elata 13.84
Mother_JuvenMother tuber of Juvenile 12.08