Detail information of GWHGAAEX018907/evm.TU.scaffold_99.120


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743761072|ref|XP_010940400.1|9.95E-45PREDICTED: dehydration-responsive element-binding protein 1F-like [Elaeis guineensis]
Swissprottr|Q8S9Z5|DRE1F_ORYSJ6.00E-39Dehydration-responsive element-binding protein 1F
trEMBLtr|K4ATE0|K4ATE0_SOLLC8.00E-43Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc01g009440.1.1}
TAIRAT5G519901.00E-31C-repeat-binding factor 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009821854442185947-
Transcript Sequence

Network for GWHGAAEX018907

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module13

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP231819.10E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.980
SRR2545915Juvenile tuber4.390
SRP108465SRR5643513five period of Gastrodia elata10.450
SRR5643514five period of Gastrodia elata4.160
SRR5643515five period of Gastrodia elata60.780
SRR5643524five period of Gastrodia elata7.050
SRR5643525five period of Gastrodia elata106.830
SRR5643528five period of Gastrodia elata14.970
SRR5643658five period of Gastrodia elata62.060
SRR5643659five period of Gastrodia elata11.210
SRR5643660five period of Gastrodia elata11.950
SRR5643661five period of Gastrodia elata14.510
SRR5643662five period of Gastrodia elata26.610
SRR5643663five period of Gastrodia elata16.550
SRR5643664five period of Gastrodia elata288.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_145.140
SRR6049655Rhizomagastrodiae_C368-T10_good_181.660
SRR6049656Rhizomagastrodiae_C368-T07_good_121.130
SRR6049657Rhizomagastrodiae_C368-T07_good_140.710
SRR6049658Rhizomagastrodiae_C368-T04_good_113.030
SRR6049659Rhizomagastrodiae_C368-T04_good_111.910
SRR6049660Rhizomagastrodiae_C368-T01_good_1101.890
SRR6049661Rhizomagastrodiae_C368-T04_good_127.450
SRR6049662Rhizomagastrodiae_C368-T01_good_119.700
SRR6049663Rhizomagastrodiae_C368-T01_good_190.130
SRR6049664Rhizomagastrodiae_C368-T10_good_147.850
SRR6049665Rhizomagastrodiae_C368-T10_good_147.850
SRP279888GastroGastrodia elata tuber 14.56
JuvenJuvenile tuber3.02
Mother_GastroMother tuber of Gastrodia elata 10.57
Mother_JuvenMother tuber of Juvenile 6.88