Detail information of GWHGAAEX018911/evm.TU.scaffold_99.124


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|407645223|ref|YP_006808982.1|3.00E-07hypothetical protein O3I_020245 [Nocardia brasiliensis ATCC 700358]
nrgi|743764095|ref|XP_010912252.1|0PREDICTED: uncharacterized protein LOC105038222 [Elaeis guineensis]
trEMBLtr|K3ZIB1|K3ZIB1_SETIT0Uncharacterized protein {ECO:0000313|EnsemblPlants:Si026313m}
TAIRAT3G528709.00E-170IQ calmodulin-binding motif family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009822494642267140-
Transcript Sequence

Network for GWHGAAEX018911

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.300
SRR2545915Juvenile tuber38.000
SRP108465SRR5643513five period of Gastrodia elata32.180
SRR5643514five period of Gastrodia elata18.120
SRR5643515five period of Gastrodia elata20.480
SRR5643524five period of Gastrodia elata19.830
SRR5643525five period of Gastrodia elata37.840
SRR5643528five period of Gastrodia elata31.190
SRR5643658five period of Gastrodia elata49.180
SRR5643659five period of Gastrodia elata32.020
SRR5643660five period of Gastrodia elata34.140
SRR5643661five period of Gastrodia elata35.270
SRR5643662five period of Gastrodia elata52.690
SRR5643663five period of Gastrodia elata40.780
SRR5643664five period of Gastrodia elata46.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.220
SRR6049655Rhizomagastrodiae_C368-T10_good_121.660
SRR6049656Rhizomagastrodiae_C368-T07_good_122.680
SRR6049657Rhizomagastrodiae_C368-T07_good_124.660
SRR6049658Rhizomagastrodiae_C368-T04_good_123.110
SRR6049659Rhizomagastrodiae_C368-T04_good_121.760
SRR6049660Rhizomagastrodiae_C368-T01_good_114.750
SRR6049661Rhizomagastrodiae_C368-T04_good_128.610
SRR6049662Rhizomagastrodiae_C368-T01_good_116.200
SRR6049663Rhizomagastrodiae_C368-T01_good_112.330
SRR6049664Rhizomagastrodiae_C368-T10_good_117.430
SRR6049665Rhizomagastrodiae_C368-T10_good_117.430
SRP279888GastroGastrodia elata tuber 48.03
JuvenJuvenile tuber7.79
Mother_GastroMother tuber of Gastrodia elata 9.58
Mother_JuvenMother tuber of Juvenile 6.76