Detail information of GWHGAAEX018912/evm.TU.scaffold_99.126
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|402773341|ref|YP_006592878.1| | 4.00E-29 | hypothetical protein BN69_2776 [Methylocystis sp. SC2] |
| KOG | KOG2730 | 2.00E-82 | Methylase |
| nr | gi|672111824|ref|XP_008802664.1| | 9.55E-107 | PREDICTED: trimethylguanosine synthase isoform X2 [Phoenix dactylifera] |
| trEMBL | tr|M5WTQ0|M5WTQ0_PRUPE | 4.00E-102 | Uncharacterized protein {ECO:0000313|EMBL:EMJ17054.1} |
| TAIR | AT1G30550 | 2.00E-82 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000098 | 2277735 | 2293133 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018912
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF09445.9 | Methyltransf_15 | 88 | 242 | 4.20E-37 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K14292 | TGS1 | RNA transport | map03013 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0001510 | Biological Process | RNA methylation |
| GO:0009452 | Biological Process | 7-methylguanosine RNA capping |
| GO:0008168 | Molecular Function | methyltransferase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 5.010 |
| SRR2545915 | Juvenile tuber | 2.890 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 4.760 |
| SRR5643514 | five period of Gastrodia elata | 6.370 | |
| SRR5643515 | five period of Gastrodia elata | 6.000 | |
| SRR5643524 | five period of Gastrodia elata | 3.670 | |
| SRR5643525 | five period of Gastrodia elata | 8.050 | |
| SRR5643528 | five period of Gastrodia elata | 5.290 | |
| SRR5643658 | five period of Gastrodia elata | 5.210 | |
| SRR5643659 | five period of Gastrodia elata | 8.720 | |
| SRR5643660 | five period of Gastrodia elata | 8.600 | |
| SRR5643661 | five period of Gastrodia elata | 8.270 | |
| SRR5643662 | five period of Gastrodia elata | 6.280 | |
| SRR5643663 | five period of Gastrodia elata | 7.320 | |
| SRR5643664 | five period of Gastrodia elata | 7.540 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 4.390 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.350 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 3.530 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 5.880 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.260 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 3.750 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 4.010 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 2.800 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.290 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.780 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 7.880 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 7.880 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 6.53 |
| Juven | Juvenile tuber | 4.53 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 8.20 | |
| Mother_Juven | Mother tuber of Juvenile | 6.00 |