Detail information of GWHGAAEX018914/evm.TU.scaffold_99.128
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|440684664|ref|YP_007159459.1| | 8.00E-74 | Cellulase [Anabaena cylindrica PCC 7122] |
| nr | gi|672189236|ref|XP_008813788.1| | 0 | PREDICTED: endoglucanase 12-like [Phoenix dactylifera] |
| Swissprot | tr|Q7XUK4|GUN12_ORYSJ | 0 | Endoglucanase 12 |
| trEMBL | tr|A0A059DC05|A0A059DC05_EUCGR | 0 | Endoglucanase {ECO:0000256|RuleBase:RU361166} |
| TAIR | AT1G65610 | 0 | Six-hairpin glycosidases superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000098 | 2303555 | 2308598 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018914
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module12 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00759.18 | Glyco_hydro_9 | 111 | 584 | 4.00E-119 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01179 | E3.2.1.4 | Metabolic pathways | map01100 |
| Starch and sucrose metabolism | map00500 | ||
| Two-component system | map02020 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005975 | Biological Process | carbohydrate metabolic process |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0004553 | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.690 |
| SRR2545915 | Juvenile tuber | 2.160 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 15.050 |
| SRR5643514 | five period of Gastrodia elata | 11.900 | |
| SRR5643515 | five period of Gastrodia elata | 22.350 | |
| SRR5643524 | five period of Gastrodia elata | 17.750 | |
| SRR5643525 | five period of Gastrodia elata | 32.040 | |
| SRR5643528 | five period of Gastrodia elata | 82.410 | |
| SRR5643658 | five period of Gastrodia elata | 49.240 | |
| SRR5643659 | five period of Gastrodia elata | 6.700 | |
| SRR5643660 | five period of Gastrodia elata | 5.140 | |
| SRR5643661 | five period of Gastrodia elata | 7.250 | |
| SRR5643662 | five period of Gastrodia elata | 6.610 | |
| SRR5643663 | five period of Gastrodia elata | 6.040 | |
| SRR5643664 | five period of Gastrodia elata | 5.150 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 5.770 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 7.350 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.600 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 4.230 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.640 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 3.450 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 2.890 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 5.120 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 4.680 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 6.370 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 9.130 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 9.130 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 11.29 |
| Juven | Juvenile tuber | 4.49 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 99.41 | |
| Mother_Juven | Mother tuber of Juvenile | 58.34 |