Detail information of GWHGAAEX018922/evm.TU.scaffold_99.136


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|563697372|ref|YP_008870122.1|8.00E-12soluble cytochrome b558 [candidate division WWE3 bacterium RAAC2_WWE3_1]
KOGKOG05372.00E-26Cytochrome b5
nrgi|743765046|ref|XP_010912740.1|9.94E-39PREDICTED: cytochrome B5 isoform D-like [Elaeis guineensis]
Swissprottr|P49098|CYB5_TOBAC3.00E-27Cytochrome b5
trEMBLtr|Q2QVN9|Q2QVN9_ORYSJ4.00E-36cDNA clone:006-309-C09, full insert sequence {ECO:0000313|EMBL:BAG87337.1}
TAIRAT5G488102.00E-26cytochrome B5 isoform D

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009824180272425862-
Transcript Sequence

Network for GWHGAAEX018922

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00173.27Cyt-b524969.10E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0020037Molecular Functionheme binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms64.870
SRR2545915Juvenile tuber63.570
SRP108465SRR5643513five period of Gastrodia elata91.490
SRR5643514five period of Gastrodia elata114.850
SRR5643515five period of Gastrodia elata82.480
SRR5643524five period of Gastrodia elata88.700
SRR5643525five period of Gastrodia elata104.820
SRR5643528five period of Gastrodia elata95.690
SRR5643658five period of Gastrodia elata101.350
SRR5643659five period of Gastrodia elata81.140
SRR5643660five period of Gastrodia elata63.550
SRR5643661five period of Gastrodia elata84.000
SRR5643662five period of Gastrodia elata79.150
SRR5643663five period of Gastrodia elata74.850
SRR5643664five period of Gastrodia elata76.830
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1110.860
SRR6049655Rhizomagastrodiae_C368-T10_good_1160.050
SRR6049656Rhizomagastrodiae_C368-T07_good_1125.330
SRR6049657Rhizomagastrodiae_C368-T07_good_1106.910
SRR6049658Rhizomagastrodiae_C368-T04_good_1105.090
SRR6049659Rhizomagastrodiae_C368-T04_good_195.070
SRR6049660Rhizomagastrodiae_C368-T01_good_1103.130
SRR6049661Rhizomagastrodiae_C368-T04_good_1123.480
SRR6049662Rhizomagastrodiae_C368-T01_good_1104.130
SRR6049663Rhizomagastrodiae_C368-T01_good_187.500
SRR6049664Rhizomagastrodiae_C368-T10_good_1142.330
SRR6049665Rhizomagastrodiae_C368-T10_good_1142.330
SRP279888GastroGastrodia elata tuber 102.71
JuvenJuvenile tuber149.93
Mother_GastroMother tuber of Gastrodia elata 79.93
Mother_JuvenMother tuber of Juvenile 92.80