Detail information of GWHGAAEX018923/evm.TU.scaffold_99.137


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427739976|ref|YP_007059520.1|4.00E-27MIP family channel protein [Rivularia sp. PCC 7116]
KOGKOG02232.00E-36Aquaporin (major intrinsic protein family)
nrgi|643741342|gb|KDP46818.1|1.96E-49hypothetical protein JCGZ_24027 [Jatropha curcas]
Swissprottr|Q40746|NIP11_ORYSJ1.00E-40Aquaporin NIP1-1
trEMBLtr|A0A067LHI9|A0A067LHI9_JATCU7.00E-50Uncharacterized protein {ECO:0000313|EMBL:KDP46818.1}
TAIRAT5G378202.00E-36NOD26-like intrinsic protein 4;2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009824438382451752-
Transcript Sequence

Network for GWHGAAEX018923

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00230.19MIP142193.50E-37
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0015267Molecular Functionchannel activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.070
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata4.990
SRR5643514five period of Gastrodia elata22.540
SRR5643515five period of Gastrodia elata5.650
SRR5643524five period of Gastrodia elata16.770
SRR5643525five period of Gastrodia elata0.300
SRR5643528five period of Gastrodia elata1.090
SRR5643658five period of Gastrodia elata0.530
SRR5643659five period of Gastrodia elata0.130
SRR5643660five period of Gastrodia elata0.270
SRR5643661five period of Gastrodia elata0.210
SRR5643662five period of Gastrodia elata0.270
SRR5643663five period of Gastrodia elata0.050
SRR5643664five period of Gastrodia elata0.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.380
SRR6049655Rhizomagastrodiae_C368-T10_good_110.250
SRR6049656Rhizomagastrodiae_C368-T07_good_19.010
SRR6049657Rhizomagastrodiae_C368-T07_good_12.090
SRR6049658Rhizomagastrodiae_C368-T04_good_19.690
SRR6049659Rhizomagastrodiae_C368-T04_good_16.560
SRR6049660Rhizomagastrodiae_C368-T01_good_13.200
SRR6049661Rhizomagastrodiae_C368-T04_good_17.300
SRR6049662Rhizomagastrodiae_C368-T01_good_130.170
SRR6049663Rhizomagastrodiae_C368-T01_good_126.720
SRR6049664Rhizomagastrodiae_C368-T10_good_125.370
SRR6049665Rhizomagastrodiae_C368-T10_good_125.370
SRP279888GastroGastrodia elata tuber 0.13
JuvenJuvenile tuber0.04
Mother_GastroMother tuber of Gastrodia elata 12.91
Mother_JuvenMother tuber of Juvenile 3.38