Gene detail

Detail information of GWHGAAEX018928/evm.TU.scaffold_99.144

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|436835855\|ref\|YP_007321071.1\|	2.00E-83	NAD+ synthetase [Fibrella aestuarina BUZ 2]
KOG	KOG2303	0	Predicted NAD synthase, contains CN hydrolase domain
nr	gi\|672111490\|ref\|XP_008800932.1\|	0	PREDICTED: glutamine-dependent NAD(+) synthetase [Phoenix dactylifera]
Swissprot	tr\|Q0D8D4\|NADE_ORYSJ	0	Glutamine-dependent NAD(+) synthetase
trEMBL	tr\|M0S5G6\|M0S5G6_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P05750_001}
TAIR	AT1G55090	0	carbon-nitrogen hydrolase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000098	2580117	2624767	-

Transcript Sequence
>GWHTAAEX018928 TTGTTCTCCCGAAGCTCGCCTCCGGCAGACGGGCGCCGGTGCTCCGCCTCCGCTTTGCTCCGCCAACGCGCTCGTCTCGCTGACGCCTAGCCCGACGCAGACGCAGACGCAGAGATGAGGCTGTTAACCACTTCAACTTGTAATCTAAATCAATGGGCCATGGACTTTGATCACAACTTGTGGAACATTAAGGTGTCTATTTCAAAAGCTAAAGACGCAGGGGCTACAATTAGAATTGGTCCAGAGCTTGAGATCACTGGTTATGGTTGTGAAGATCATTTTTTGGAGGAAGATACTATGACCCATGCTTGGGAATGTTTGAAGGATCTCTTGTGTGGTAATTGGACTGATGACATATTATGCAGTATTGGCATGCCCATTATACATGAATCTGTGCGGTACAACTGCCAGGTATTTTGCCTGGATGGGAAGATTATCATGATACGCCCAAAGATTTGCCTTGCAAATGATGAAAATTACAGAGAGTTACGCTGGTTTTCAGCTTGGAAATTTAAAGGCAAGCTTGTTGATTTTCAACTCCCTAGTGTCATTTCTATGGCTACATCACAGACCTCAGCACCTTTTGGATTTGGTTATATTCAATTTCAAGACACTGCTGTGGCTGCAGAAATCTGTGAAGAGCTTTTTTCTGCTAATGCACCCCGAGTTGGACTTGCTTATAATGGTGTTGAGGTCTTTACAAATGCAAGCGGAAGTCACCACCAGATAAGAAAACTTAATATTCGAATTGATGCAATTAAAAGTGCAACTTGGTTTTGCGGAGGTGTTTACATGTATAGCAATCAGCAGGGCTGTGATGGTGGTCGTCTCTATTTTGATGGATGCTGCTTAATTGCTATGAACGGGGAAGTTGTTGCTCAGGGATCTCAATTCTCATTGAAGGAAATTGAAGTTCTTACCGCCGTTGTTGACCTTGATGCTGTCTCTAGTTACCGTGCATCTATTAGTAGTTTCAGAGAATCTGCGAGTGATGCATTGAAGGTTCCAGTGGTGAAAGTGCCACGCAAGCTTTGTCAACCATTTCAACTTTGTACTTTCCCTACTAATCCAGTGGAGATTAAATATCACCATCCTGAAGAAGAAATAGCATTTGGGCCTAGTTGTTGGCTATGGGATTATCTAAGAAGAAGCGGAGCTTCTGGATTCTTACTACCTCTTTCCGGAGGAGCTGATAGTTCTGCAGTTGCAGCTATTGTAGGTTGCATGTGCCAACTTGTGATCAGGGATATTGAGAAAGGTGATGACCAAGTCAAAGCAGATGCATTAAGGGTTGGAAATTACAAAAATGGGGAGTTTCCACGCTGCAGTAAAGAGTTTTCAAGGAGAATCTTATATACTGTGTTTATGGGAACTGAGAATAGCTCTGATACTACTAGAGGTAGAGCCAAGAAATTGGCTGAAGAAATAGGTTCTTGGCACCTTGATGTGAATTTAGATGGCATTGTTTGTTCATTCCTCTCTTTATTCCATTCATTAACAGGAAAACGACCACTGTATAAGGTTGATGGTGGATCAAATGCTGAAAATTTAGCGTTGCAGAATATTCAAGCTCGAATCCGAATGGTGTTAGCATATATGATGGCCTCTCTGTTGCCGTGGGTTCATAATAAATCTGGATTTTATCTAGTGTTGGGCAGTTCAAACGTGGATGAAGCATTGCGTGGTTATCTGACAAAGTATGACTGCAGTTCGGCCGATTTAAATCCAATTGGGGGTGTTAGCAAGAAGGATCTTAGGTCTTTCTTGAAGTGGGCAGCTGTTCATCTCAATTATCCTTCTTTGGCAGAAATTGAAGCAGCACCTCCTACTGCTGAGTTAGAACCAATACGTTCCAATTATTCTCAGTTGGATGAAGTAGACATGGGCATGACATACGAGGAATTGTCTGTATATGGAAGGCTGCGAAAGATATTTTATTGCGGCCCCGTGTCAATGTTTCAGAATCTCTGCCAAAAATGGTATGGAAAGTTATCTCCAGCAGAAGTGGCTGATAAAGTGAAGCATTTCTTCAAGTATTACTCCATCAATCGACACAAGATGACTGTGCTGACGCCATCATACCATGCAGAAAGCTACTCCCCTGAAGATAACAGATTTGATCTCCGCCAATTCCTTTATAATTCGAGATGGCCTTACCAGTTTCGAAAGATCGATGAAATCGTGCGTGATCTGGAAGCAGCGGACCACCCCGGCAATCCACGTGTCGGAGCATGATCTGTGGATCAACAACCTCTGTTTCTGGGTTTAGGAAAAAACCTTCAATTGCTTTACTATAATTTTAACTGCTTTTGACAATTATTTTGAACTTTATAATATAATTAACTACATTAATGATTTATGGTCGTCATTGTTTCTTTTAATATCGCAAAACTTTAATATTTATCATTTTCAAGTGTAGATATGTAATACACAAGTTTTGCTTGTTGCGCTTGCAATAAATCATATTGTATCGGTGCATTTATTTCAGATTTAC

Network for GWHGAAEX018928

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00795.21	CN_hydrolase	8	281	3.40E-27
PF02540.16	NAD_synthase	338	599	9.70E-28

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01950	E6.3.5.1, NADSYN1, QNS1, nadE	Metabolic pathways	map01100
K01950	E6.3.5.1, NADSYN1, QNS1, nadE	Nicotinate and nicotinamide metabolism	map00760

Gene Ontology

GO term	Ontology	Name
GO:0006807	Biological Process	nitrogen compound metabolic process
GO:0009435	Biological Process	NAD biosynthetic process
GO:0004359	Molecular Function	glutaminase activity
GO:0003952	Molecular Function	NAD+ synthase (glutamine-hydrolyzing) activity
GO:0005524	Molecular Function	ATP binding
GO:0005737	Cellular Component	cytoplasm

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	47.970
SRP064423	SRR2545915	Juvenile tuber	32.020
SRP108465	SRR5643513	five period of Gastrodia elata	39.480
	SRR5643514	five period of Gastrodia elata	44.790
	SRR5643515	five period of Gastrodia elata	37.680
	SRR5643524	five period of Gastrodia elata	43.670
	SRR5643525	five period of Gastrodia elata	45.040
	SRR5643528	five period of Gastrodia elata	43.780
	SRR5643658	five period of Gastrodia elata	50.230
	SRR5643659	five period of Gastrodia elata	29.780
	SRR5643660	five period of Gastrodia elata	27.280
	SRR5643661	five period of Gastrodia elata	28.290
	SRR5643662	five period of Gastrodia elata	33.230
	SRR5643663	five period of Gastrodia elata	33.440
	SRR5643664	five period of Gastrodia elata	30.600
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	34.240
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	40.250
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	31.410
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	39.120
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	35.170
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	39.740
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	35.250
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	34.340
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	33.110
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	35.140
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	39.000
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	39.000
SRP279888	Gastro	Gastrodia elata tuber	34.85
	Juven	Juvenile tuber	38.04
	Mother_Gastro	Mother tuber of Gastrodia elata	35.95
	Mother_Juven	Mother tuber of Juvenile	47.48