Detail information of GWHGAAEX018930/evm.TU.scaffold_99.146_evm.TU.scaffold_99.147
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|226229240|ref|YP_002763346.1| | 5.00E-26 | putative serine/threonine protein kinase [Gemmatimonas aurantiaca T-27] |
| KOG | KOG1187 | 3.00E-126 | Serine/threonine protein kinase |
| nr | gi|743887384|ref|XP_010910365.1| | 1.58E-143 | PREDICTED: putative receptor-like protein kinase At4g00960 [Elaeis guineensis] |
| Swissprot | tr|Q9C5S9|CRK6_ARATH | 3.00E-90 | Cysteine-rich receptor-like protein kinase 6 (Precursor) |
| trEMBL | tr|B9HW43|B9HW43_POPTR | 5.00E-136 | Kinase family protein {ECO:0000313|EMBL:EEF02042.2} |
| TAIR | AT1G70740 | 3.00E-126 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000098 | 2667743 | 2676391 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018930
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module3 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 54 | 318 | 1.20E-48 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_DLSV |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 8.570 |
| SRR2545915 | Juvenile tuber | 10.820 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 8.000 |
| SRR5643514 | five period of Gastrodia elata | 8.590 | |
| SRR5643515 | five period of Gastrodia elata | 13.880 | |
| SRR5643524 | five period of Gastrodia elata | 11.560 | |
| SRR5643525 | five period of Gastrodia elata | 24.710 | |
| SRR5643528 | five period of Gastrodia elata | 28.800 | |
| SRR5643658 | five period of Gastrodia elata | 26.240 | |
| SRR5643659 | five period of Gastrodia elata | 44.190 | |
| SRR5643660 | five period of Gastrodia elata | 47.130 | |
| SRR5643661 | five period of Gastrodia elata | 38.670 | |
| SRR5643662 | five period of Gastrodia elata | 43.300 | |
| SRR5643663 | five period of Gastrodia elata | 43.030 | |
| SRR5643664 | five period of Gastrodia elata | 46.830 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 9.780 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 8.360 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 7.870 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 9.740 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 6.950 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 7.100 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 9.460 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 6.120 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.650 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 6.250 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 4.860 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 4.860 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 17.33 |
| Juven | Juvenile tuber | 11.08 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 22.49 | |
| Mother_Juven | Mother tuber of Juvenile | 9.19 |