Gene detail

Detail information of GWHGAAEX018931/evm.TU.scaffold_99.148

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG4302	Microtubule-associated protein essential for anaphase spindle elongation
nr	gi\|672162191\|ref\|XP_008800929.1\|	PREDICTED: 65-kDa microtubule-associated protein 3 isoform X2 [Phoenix dactylifera]
Swissprot	tr\|Q9FHM4\|MA653_ARATH	65-kDa microtubule-associated protein 3
trEMBL	tr\|M0SXL3\|M0SXL3_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P11340_001}
TAIR	AT5G51600	Microtubule associated protein (MAP65/ASE1) family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000098	2680744	2692069	-

Transcript Sequence
>GWHTAAEX018931 TTCAAATCTAATCCTTCTTCGAGCCTTTGTGCTTCCGTTCTTCTTTCAAAGTCGTCTCAAGTGCGCTTTATTCCTGAAAAACCTGTGGTGTGTGACAGTGTTTCTTCAGATGGCTACTTCTCATAATGCCCAGCTTTCCCAGATTGAAACAACTTGTGGATCTCTGTTATATGAGCTTCATATGATATGGGATGAAGTTGGAGAATACAATGCGGAAAGAGACAAAATGATTCTTGAGTTAGAACAAGAGTGCTTGGAGGTATATAGAAGAAAGGTTGATCAAGCTAATCAGTCTAGGGCCTATTTACGTCAAGCAATAGCTGATGTGGAAGCTGAGCTGGCTTCTATCTGCTCTTCGCTGGGAGACAGACCAGTTCATATCAGCAAGCCCAATCAACATGTATTAAGTTTGAAGGAGGAGTACAAGGCTTTGACACCACAATTGGAAGAAATGCGAAAAAGGAAGAGCGAGAGGCTGAGTCATTTTCTTCAAGTTACGGAACAAATAAGGAAGATCTCAAGTGAAGTCTGGACTAATGGGCAAGCTCAATTCAAAATGAATGTTGATGAATCCGATCTATCCACACGAAAGCTTGAAGAATTTCAGAAACAATTAGAAGCTCTACAGAAGGAAAAGGCTGATCGCCTTCAGAAAGTGTTGGAACATTTAAGTACTTTAAACGCATTATGTGTAGTTCTTGGTATAGATTTCAAGCAAACAGTTATGGAAGTTCACCCTAGTTTGGATGACTCTGAAGGGTCTAAAGTTGTTAGCAATGAGGTGATTGAAAGGCTGGCTTCTATCATTAAAAGCTTGAGGGAGATTAAATTACAAAGAATGCAGAAGCTTCAAGATCTTGCAGCCAGCATGTTGGAACTTTGGAATCTAATGGACACGCCATTTGAAGAGCAACAAATATTTCAGAGCGTAACATGTAATGTTGCTGCTTCAGAACATGAAATAACAGACCCAAACTTTCTATCAGCTGATTTCCTTAACTATGTAGAGGCAGAGGTAGTGAGACTTGAAGAGCTGAAAGCTAGCAAGATGAAGGAGCTGGTTCTCAAGAAGAAGACTGAGCTGGAGGAGCTACGTCGCAGGACACATTTGATTGAAAATGGTGATGATGATGCTGAAATCTCAGCTGAAATCATTGAAGTTGGTGCTGTTGAACCATGTTTAATTCTAGAGCGATTTGAAGCCCAGATTTCAGGTGTCAAAGAAGAAGCATTTAGCAGGAAAGACATACTTGAGAAGGTTGAGAAATGGATGTCTGCTTGTGAAGAAGAGGCTTGGCTTGAGGAGTACAATAGGGATGAAAACCGATATAGTGCCGGCAGGGGGGTCCATCTCGCATTAAAACGTGCTGAAAAAGCTCGAGCTACAGCCCAAAGGATTCCTGGAATTGTGGAAGCTTTATGCAATAAAATCATAGCATGGGAAAATGAAAGAGGCACTGAGTTTACTTATGATGGAGTTCGTCTTTTATCAATGCTAGAAGAGTACACTTTTATCCGGCAGGAGAAGGAGGAGGAGCGAAAAAGGCAGAGGGATCATAAGAAGCTCCAAAGCCAGTTTCTAGCTGAGCAGGAAGCACTCTTTGGATCGAAACCGAGCCCTTCAAAGCCTCAGAGCGCGAAAAAGGCTCCCAGAATTTCTTCAGGGTTCACTAACCGAAGGATGTCTCTCGGAGGAGCAGCGGCAACCGCATTACAGAAACAACCAGATTTTGCTTGCATCAAGGCATCACCATCAACCAAGAGAGGAAACGAATTCACTCTTGTTTCTCCTGCCAAGAAGCAGCTTCCATCAATGAATGTTCTTCAACCGGAACCTCCCCGAAGATCGCTCGGTCCGGCGATCCAAGCAGAAACGCCGAGGAAGCCATTTGCTCCCCTTCCGGTTCACGCCAACGGCAGCAGCAACCTGCCCTCGACCCCTGTCGCGTTCTTGCAGGTCGCCGCCGAAGAGGTTGAGAATCGGGCGCCCCAGTCGCCACAGCCGGTGCCAAAAACTCCGGCCGTCGTTATCCCGAGAGCAGCCACAGTCAATGAAATGGAGTATTCCTTTGAAGAGAGAAGGCTTGCAGTTTACCTGCAGAGAAGTTTGGGAGGGGACGGCGGCTTGTTCATCCCTCTCCCACAATAATGGTTGCAGTGTTATTTTTAGTAAAAATCTGCTCTTTTTTGGCTTTTAGGAGAAATATGATTAATTGTTATTGATGCTATTTTATGCGGAATCTATTCAATCGAAGCTGGCATCAATACAGCCCCTTGAAGTTACTTTATAAGATTTGTTTTTCTTATTTTTTTTTTTTTT

Network for GWHGAAEX018931

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03999.11	MAP65_ASE1	86	608	1.10E-115

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.870
SRP064423	SRR2545915	Juvenile tuber	1.870
SRP108465	SRR5643513	five period of Gastrodia elata	2.570
	SRR5643514	five period of Gastrodia elata	3.830
	SRR5643515	five period of Gastrodia elata	2.270
	SRR5643524	five period of Gastrodia elata	2.940
	SRR5643525	five period of Gastrodia elata	57.840
	SRR5643528	five period of Gastrodia elata	74.070
	SRR5643658	five period of Gastrodia elata	88.960
	SRR5643659	five period of Gastrodia elata	1.830
	SRR5643660	five period of Gastrodia elata	0.800
	SRR5643661	five period of Gastrodia elata	4.970
	SRR5643662	five period of Gastrodia elata	1.780
	SRR5643663	five period of Gastrodia elata	2.300
	SRR5643664	five period of Gastrodia elata	1.380
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.340
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.550
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.520
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.060
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.170
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.280
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.170
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.840
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	10.160
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.010
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.220
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.220
SRP279888	Gastro	Gastrodia elata tuber	2.74
	Juven	Juvenile tuber	3.17
	Mother_Gastro	Mother tuber of Gastrodia elata	21.54
	Mother_Juven	Mother tuber of Juvenile	2.33