Detail information of GWHGAAEX018934/evm.TU.scaffold_99.151


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16329.00E-117Uncharacterized PHD Zn-finger protein
nrgi|695066052|ref|XP_009379903.1|1.19E-142PREDICTED: PHD finger protein ALFIN-LIKE 8-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q2R837|ALFL8_ORYSJ2.00E-121PHD finger protein ALFIN-LIKE 8
trEMBLtr|M0RIQ5|M0RIQ5_MUSAM4.00E-143Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P16300_001}
TAIRAT3G427909.00E-117alfin-like 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009827737442794089+
Transcript Sequence

Network for GWHGAAEX018934

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12165.7Alfin121392.60E-66
PF00628.28PHD1962449.50E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAlfin-like

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042393Molecular Functionhistone binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms53.500
SRR2545915Juvenile tuber41.390
SRP108465SRR5643513five period of Gastrodia elata50.430
SRR5643514five period of Gastrodia elata52.040
SRR5643515five period of Gastrodia elata49.450
SRR5643524five period of Gastrodia elata49.220
SRR5643525five period of Gastrodia elata64.150
SRR5643528five period of Gastrodia elata63.490
SRR5643658five period of Gastrodia elata61.130
SRR5643659five period of Gastrodia elata56.960
SRR5643660five period of Gastrodia elata51.940
SRR5643661five period of Gastrodia elata56.260
SRR5643662five period of Gastrodia elata54.490
SRR5643663five period of Gastrodia elata51.950
SRR5643664five period of Gastrodia elata60.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.150
SRR6049655Rhizomagastrodiae_C368-T10_good_136.130
SRR6049656Rhizomagastrodiae_C368-T07_good_149.100
SRR6049657Rhizomagastrodiae_C368-T07_good_140.820
SRR6049658Rhizomagastrodiae_C368-T04_good_148.330
SRR6049659Rhizomagastrodiae_C368-T04_good_148.260
SRR6049660Rhizomagastrodiae_C368-T01_good_144.540
SRR6049661Rhizomagastrodiae_C368-T04_good_146.600
SRR6049662Rhizomagastrodiae_C368-T01_good_147.720
SRR6049663Rhizomagastrodiae_C368-T01_good_146.680
SRR6049664Rhizomagastrodiae_C368-T10_good_153.960
SRR6049665Rhizomagastrodiae_C368-T10_good_153.960
SRP279888GastroGastrodia elata tuber 63.84
JuvenJuvenile tuber34.62
Mother_GastroMother tuber of Gastrodia elata 52.47
Mother_JuvenMother tuber of Juvenile 39.92