Detail information of GWHGAAEX018946/evm.TU.scaffold_99.163


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|433638150|ref|YP_007283910.1|7.00E-24peptidyl-tRNA hydrolase [Halovivax ruber XH-70]
KOGKOG32821.00E-36Uncharacterized conserved protein
nrgi|573946331|ref|XP_006655499.1|2.00E-73PREDICTED: probable peptidyl-tRNA hydrolase 2-like [Oryza brachyantha]
trEMBLtr|J3M8Z6|J3M8Z6_ORYBR7.00E-74Uncharacterized protein {ECO:0000313|EnsemblPlants:OB05G30700.1}
TAIRAT4G329001.00E-36Peptidyl-tRNA hydrolase II (PTH2) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009829924163055675-
Transcript Sequence

Network for GWHGAAEX018946

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01981.15PTH2811941.10E-41
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0004045Molecular Functionaminoacyl-tRNA hydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms82.610
SRR2545915Juvenile tuber72.660
SRP108465SRR5643513five period of Gastrodia elata57.860
SRR5643514five period of Gastrodia elata58.520
SRR5643515five period of Gastrodia elata51.670
SRR5643524five period of Gastrodia elata55.300
SRR5643525five period of Gastrodia elata95.120
SRR5643528five period of Gastrodia elata74.980
SRR5643658five period of Gastrodia elata93.600
SRR5643659five period of Gastrodia elata34.380
SRR5643660five period of Gastrodia elata43.480
SRR5643661five period of Gastrodia elata39.670
SRR5643662five period of Gastrodia elata39.730
SRR5643663five period of Gastrodia elata29.170
SRR5643664five period of Gastrodia elata33.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_170.420
SRR6049655Rhizomagastrodiae_C368-T10_good_156.200
SRR6049656Rhizomagastrodiae_C368-T07_good_167.710
SRR6049657Rhizomagastrodiae_C368-T07_good_173.720
SRR6049658Rhizomagastrodiae_C368-T04_good_180.910
SRR6049659Rhizomagastrodiae_C368-T04_good_179.640
SRR6049660Rhizomagastrodiae_C368-T01_good_187.910
SRR6049661Rhizomagastrodiae_C368-T04_good_166.930
SRR6049662Rhizomagastrodiae_C368-T01_good_163.960
SRR6049663Rhizomagastrodiae_C368-T01_good_168.570
SRR6049664Rhizomagastrodiae_C368-T10_good_188.620
SRR6049665Rhizomagastrodiae_C368-T10_good_188.620
SRP279888GastroGastrodia elata tuber 57.87
JuvenJuvenile tuber55.20
Mother_GastroMother tuber of Gastrodia elata 41.42
Mother_JuvenMother tuber of Juvenile 30.53