Detail information of GWHGAAEX018955/evm.TU.scaffold_99.174
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|108803345|ref|YP_643282.1| | 3.00E-26 | serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941] |
| KOG | KOG0032 | 0 | Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily |
| nr | gi|672145876|ref|XP_008796870.1| | 0 | PREDICTED: CDPK-related kinase 3-like [Phoenix dactylifera] |
| Swissprot | tr|Q9ZUZ2|CAMK3_ARATH | 0 | CDPK-related kinase 3 |
| trEMBL | tr|M0TF21|M0TF21_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P05810_001} |
| TAIR | AT2G46700 | 0 | CDPK-related kinase 3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000098 | 3388829 | 3411144 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018955
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 8 | 224 | 1.60E-63 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CAMK_CDPK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 17.510 |
| SRR2545915 | Juvenile tuber | 15.070 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 21.230 |
| SRR5643514 | five period of Gastrodia elata | 20.730 | |
| SRR5643515 | five period of Gastrodia elata | 17.500 | |
| SRR5643524 | five period of Gastrodia elata | 20.910 | |
| SRR5643525 | five period of Gastrodia elata | 28.250 | |
| SRR5643528 | five period of Gastrodia elata | 31.510 | |
| SRR5643658 | five period of Gastrodia elata | 29.700 | |
| SRR5643659 | five period of Gastrodia elata | 13.890 | |
| SRR5643660 | five period of Gastrodia elata | 13.130 | |
| SRR5643661 | five period of Gastrodia elata | 14.600 | |
| SRR5643662 | five period of Gastrodia elata | 14.910 | |
| SRR5643663 | five period of Gastrodia elata | 14.100 | |
| SRR5643664 | five period of Gastrodia elata | 15.180 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.650 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 18.360 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 20.910 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 21.800 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 27.650 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 27.150 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 20.670 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 21.200 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 21.010 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 20.520 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 26.210 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 26.210 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 15.29 |
| Juven | Juvenile tuber | 17.08 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 25.90 | |
| Mother_Juven | Mother tuber of Juvenile | 26.38 |