Detail information of GWHGAAEX018960/evm.TU.scaffold_99.180
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|88658049|ref|YP_507847.1| | 7.00E-14 | glutaredoxin 3 [Ehrlichia chaffeensis str. Arkansas] |
| KOG | KOG1752 | 4.00E-42 | Glutaredoxin and related proteins |
| nr | gi|672145898|ref|XP_008796882.1| | 5.97E-50 | PREDICTED: monothiol glutaredoxin-S6-like [Phoenix dactylifera] |
| Swissprot | tr|Q6H628|GRXS6_ORYSJ | 2.00E-47 | Monothiol glutaredoxin-S6 |
| trEMBL | tr|W1NM65|W1NM65_AMBTC | 5.00E-49 | Uncharacterized protein {ECO:0000313|EMBL:ERM96354.1} |
| TAIR | AT1G77370 | 4.00E-42 | Glutaredoxin family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000098 | 3589679 | 3596643 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018960
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00462.23 | Glutaredoxin | 95 | 157 | 1.70E-18 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0045454 | Biological Process | cell redox homeostasis |
| GO:0015035 | Molecular Function | protein disulfide oxidoreductase activity |
| GO:0009055 | Molecular Function | electron carrier activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 21.400 |
| SRR2545915 | Juvenile tuber | 16.020 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.140 |
| SRR5643514 | five period of Gastrodia elata | 14.110 | |
| SRR5643515 | five period of Gastrodia elata | 16.860 | |
| SRR5643524 | five period of Gastrodia elata | 17.350 | |
| SRR5643525 | five period of Gastrodia elata | 28.370 | |
| SRR5643528 | five period of Gastrodia elata | 23.050 | |
| SRR5643658 | five period of Gastrodia elata | 29.310 | |
| SRR5643659 | five period of Gastrodia elata | 11.510 | |
| SRR5643660 | five period of Gastrodia elata | 12.220 | |
| SRR5643661 | five period of Gastrodia elata | 14.350 | |
| SRR5643662 | five period of Gastrodia elata | 13.000 | |
| SRR5643663 | five period of Gastrodia elata | 9.760 | |
| SRR5643664 | five period of Gastrodia elata | 10.850 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 9.990 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 5.470 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 7.450 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 9.630 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 8.130 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 12.070 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 10.800 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 8.440 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 8.180 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 10.370 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 9.110 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 9.110 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 13.94 |
| Juven | Juvenile tuber | 13.67 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 22.14 | |
| Mother_Juven | Mother tuber of Juvenile | 10.29 |