Gene detail

Detail information of GWHGAAEX018963/evm.TU.scaffold_99.183_evm.TU.scaffold_99.184

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|743829245\|ref\|XP_010934095.1\|	PREDICTED: uncharacterized protein LOC105054295 isoform X1 [Elaeis guineensis]
trEMBL	tr\|M0S7B8\|M0S7B8_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P12270_001}
TAIR	AT3G51050	FG-GAP repeat-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000098	3722959	3803456	+

Transcript Sequence
>GWHTAAEX018963 CAATTTTCTTATTTATTTGTTGAATTTCTGATAATTCTCTACCTCCTTGAGCATTATGCACGAGTGGATTGATTTGTTGAACCGGATCGGCGATTGAACCGATTCACTATCCGAGGTGAATGGGCGATCGGACTTGATGCTCTTTGTGCAGTGGCTGACTGCTTTTCCTGAGATCGGAGTTGGCACTAAAAAGAAAATCCAGGCGAGAGCAAGACGAATCTTCAACGTGAGTATATTACCTATAAGCTCGCTTGTTGCTGAGAGGGCAGTGAAGGAGAAAAGATGAGGAAACGTGATTTGGGAATTCTTATGCTCTCTGCCTTTGCAATCTTTTTCTCTCTCCAGCATGAAGGTGATCTTTCGTTTAAGGAGGCCTGGATCCATATCACTGAGGAGTATCCAATCAAATATGAAACAGAGCGTTTGCCACCACCGATTGTTACTGATCTGAATGGCGATGGAAAAAGTGAAGTGCTTGTTGCAACCCATGATGCAAAAATTCAGGTCTTGGAGCCGCATTATAGACGTGTGGATGAAGGATTTAGTGAAGCACGGTTGTTGGCTGAACTTTCTTTACTGCCTGATAAGGTCCGCATATCATCCGGGAGACGCCCTGTTGCAATGGCAGCGGGCTATGTTGACCGCAGTTATAAACATGGAGAAATAAGAAAGCAAGTGTTAGTTGTTGTTACATCTGGCTGGTCAGTTATGTGTTTTGATCACAATCTTAAAAAGCTCTGGGAAACTAATTTGCAGGAAGATTTTCCACATGGTGCTCACCATAGAGAGATTGCAATTACTATAACGAATTTCACGCTAAGACATGGAGATGCAGGGCTAGTGATTGTTGGTGCAAGGATGGAAATGAAACATAACACGTTTGATTTATTCGAAGAAAGCTTTCTGTCTGATAAAACTGAAGAACTGCATTTTAAAAATGCAAATGAGAAAGAGGCCTCCAACAGTGCATCTGTAGATCTTCGCCATTTTGCATTTTATGCATTTGCTGGTCGCTCCGGCTCTGTCCGATGGACTAGAAAGAACGAAAATATCCAGGTAGAATCTTATGATGCATCACGGTTGATTCCACAACACAATTACAAGCTTGATGCTCATGCTTTGAATAGTCGCCATCCTGGAGAGTTTGAATGCAGGGAATTCAGGGAATCTATTCTTAGAGTAATGCCTCATCGTTGGGATAGAAGAGAAGATACTTACTTGGAGCTTGCACATTTTAGAAAGCACAAAAGGAAATTACTGAAGAGAATGTCAGGAAAATCCTCAACAAATCCTTTGCATATGCCTGTTGAAAACAACCCTCCTGGAAAGGATTCATCTAATAAAATTGCTAGGGCGATTGTGAAAGCTGCAAGTTATGCTAACTCAGCAAAGCAAAAGAAGAGGCACCTTTATATTCCCACCATTACAAATCATACTCAGTTTTGGTGGGTTCCAAATGTTGTTGTTGCTCATCAGAAGGAAGGAATAGAAGCTGTTCATTTGGCATCAGGACGAACAATTTGCAAGCTTCATCTTCCTGAAGGAGGCCTTCATGCTGATATTAATGGAGATGGAGTCTTAGACCATGTTCAGGTGGTTGGAGGGAACGGTGCTGAAGGAAGTGTTGTGACGGGTTCCATGGAGGTGCTGAAGCCCTGCTGGGCTGTCGCCACATCCGGCGTTCCTGTTCGGGAGCAGCTCTTCAACACTTCCATCTGCCACCATTCTCACTTCAATCTATTCCACCATGCAGATTTTGCCCGCAGCTTCGGTAGAACAGCTGCTGATACAGCCCCTCTCGAGGTTGCCACTCCAATTCTCTTGCACACTGCCGATGGCGACCGCAAGCACCATCAACGAAGCCACGGCGATCTCATCTTCCTGACCAGCCATGGAGAGGTTACCTCGTTCGCTCCTGGGTTGCACGGCGCGGGTGGCATCTGGAAATGGCAGCTCATCACGGGGGCGACGTGGTCGAATCTCCCGTCCCCGTCGGGAATGGCGGAAGAGGCTCCTGCTGTGGTCGTGCCAACTCTGAAGGCTTTTCCTCTGAGAGCACACAGAAGCAAGGAGGTGATAATCGCCGGCGGCGATCAGGAGGCTGTGGTGATATCTCCTGGAGGAAGCAGCTTAACCTCGATCATGCTGCCAGGACCTCCCACCCACGCCCTCGTGCTGGAAGACTTCTCCGGCGACGGATTCACTGACATTATTCTCGTGACGTCCGGTGGGGTCTACGGTTTCGTGCAGACCAGGCATCCTGGGGCTCTTTTCTTCAGCACACTTATCGGCTGCCTCCTCATCATCATGGCCGTCATTTTCGTGTCTCAGCACCTCAATTCTATGGGAAAATCTAAGCCAGGGCCTGCTTCAACTGATTACAGATGAATGCAATTTGCCTCTGAACGACATATCTAACTTTTAAGTTTTGGTACTTGCAAAGGGAACATCTCATCATACTTTTTCTCTATTCACAATGATTAAGAGTGTTAAATTGAATGATAATTTTGATTTAGTAATAAGAATTGGAGTGATAATTTTATAATATTTAAGATTCAGATTTATCTCGAAATGATTTATATGATGGTACAATTTATGATGAGCTATACTGTAATGTTGGTGATATTATTGTATTTTAGTGAACTCTCTAAGTCTTAGCATGCAGCTTTTATTAACTGATTAAGAATTTAAATTGTGCA

Network for GWHGAAEX018963

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	207.080
SRP064423	SRR2545915	Juvenile tuber	180.970
SRP108465	SRR5643513	five period of Gastrodia elata	115.600
	SRR5643514	five period of Gastrodia elata	99.110
	SRR5643515	five period of Gastrodia elata	95.630
	SRR5643524	five period of Gastrodia elata	99.200
	SRR5643525	five period of Gastrodia elata	88.310
	SRR5643528	five period of Gastrodia elata	82.570
	SRR5643658	five period of Gastrodia elata	80.310
	SRR5643659	five period of Gastrodia elata	106.430
	SRR5643660	five period of Gastrodia elata	103.480
	SRR5643661	five period of Gastrodia elata	102.640
	SRR5643662	five period of Gastrodia elata	76.500
	SRR5643663	five period of Gastrodia elata	96.020
	SRR5643664	five period of Gastrodia elata	88.700
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	123.690
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	104.260
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	100.430
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	133.770
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	113.130
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	131.880
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	118.310
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	115.920
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	104.460
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	99.130
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	105.620
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	105.620
SRP279888	Gastro	Gastrodia elata tuber	101.24
	Juven	Juvenile tuber	155.46
	Mother_Gastro	Mother tuber of Gastrodia elata	68.97
	Mother_Juven	Mother tuber of Juvenile	123.10