Detail information of GWHGAAEX018965/evm.TU.scaffold_99.186


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21970Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins
nrgi|695072118|ref|XP_009383166.1|0PREDICTED: uncharacterized protein LOC103970983 isoform X1 [Musa acuminata subsp. malaccensis]
trEMBLtr|M5WU27|M5WU27_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ10280.1}
TAIRAT5G419400Ypt/Rab-GAP domain of gyp1p superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009838202923845605+
Transcript Sequence

Network for GWHGAAEX018965

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00566.17RabGAP-TBC3554751.30E-31
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.250
SRR2545915Juvenile tuber19.000
SRP108465SRR5643513five period of Gastrodia elata23.760
SRR5643514five period of Gastrodia elata27.920
SRR5643515five period of Gastrodia elata22.360
SRR5643524five period of Gastrodia elata25.990
SRR5643525five period of Gastrodia elata24.650
SRR5643528five period of Gastrodia elata21.570
SRR5643658five period of Gastrodia elata28.900
SRR5643659five period of Gastrodia elata26.020
SRR5643660five period of Gastrodia elata24.390
SRR5643661five period of Gastrodia elata27.110
SRR5643662five period of Gastrodia elata30.600
SRR5643663five period of Gastrodia elata27.820
SRR5643664five period of Gastrodia elata27.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.880
SRR6049655Rhizomagastrodiae_C368-T10_good_122.650
SRR6049656Rhizomagastrodiae_C368-T07_good_127.490
SRR6049657Rhizomagastrodiae_C368-T07_good_122.980
SRR6049658Rhizomagastrodiae_C368-T04_good_119.710
SRR6049659Rhizomagastrodiae_C368-T04_good_122.160
SRR6049660Rhizomagastrodiae_C368-T01_good_126.520
SRR6049661Rhizomagastrodiae_C368-T04_good_123.290
SRR6049662Rhizomagastrodiae_C368-T01_good_123.670
SRR6049663Rhizomagastrodiae_C368-T01_good_122.350
SRR6049664Rhizomagastrodiae_C368-T10_good_127.570
SRR6049665Rhizomagastrodiae_C368-T10_good_127.570
SRP279888GastroGastrodia elata tuber 19.90
JuvenJuvenile tuber21.18
Mother_GastroMother tuber of Gastrodia elata 16.41
Mother_JuvenMother tuber of Juvenile 14.31