Detail information of GWHGAAEX018967/evm.TU.scaffold_99.190
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|262199486|ref|YP_003270695.1| | 4.00E-25 | serine/threonine protein kinase [Haliangium ochraceum DSM 14365] |
| KOG | KOG0582 | 0 | Ste20-like serine/threonine protein kinase |
| nr | gi|672167930|ref|XP_008803945.1| | 0 | PREDICTED: serine/threonine-protein kinase sid1-like isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|O23304|BLUS1_ARATH | 7.00E-95 | Serine/threonine-protein kinase BLUS1 |
| trEMBL | tr|D7TVQ3|D7TVQ3_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI34578.3} |
| TAIR | AT4G10730 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000098 | 3865754 | 3932373 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018967
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 26 | 287 | 2.20E-60 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | STE_STE20-Fray |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 18.620 |
| SRR2545915 | Juvenile tuber | 15.860 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 9.890 |
| SRR5643514 | five period of Gastrodia elata | 9.340 | |
| SRR5643515 | five period of Gastrodia elata | 10.340 | |
| SRR5643524 | five period of Gastrodia elata | 9.270 | |
| SRR5643525 | five period of Gastrodia elata | 8.830 | |
| SRR5643528 | five period of Gastrodia elata | 8.830 | |
| SRR5643658 | five period of Gastrodia elata | 11.200 | |
| SRR5643659 | five period of Gastrodia elata | 7.370 | |
| SRR5643660 | five period of Gastrodia elata | 9.230 | |
| SRR5643661 | five period of Gastrodia elata | 7.110 | |
| SRR5643662 | five period of Gastrodia elata | 8.510 | |
| SRR5643663 | five period of Gastrodia elata | 8.240 | |
| SRR5643664 | five period of Gastrodia elata | 10.440 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 10.800 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 13.470 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 12.800 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 11.770 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 14.190 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 16.310 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 12.390 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 14.000 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 10.980 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 11.080 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 10.940 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 10.940 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 13.87 |
| Juven | Juvenile tuber | 13.73 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 14.26 | |
| Mother_Juven | Mother tuber of Juvenile | 20.89 |