Detail information of GWHGAAZE000074


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009628660.10PREDICTED: DELLA protein RGL1-like [Nicotiana tomentosiformis]
Swissprottr|Q8S4W7|GAI1_VITVI7E-56DELLA protein GAI1
trEMBLtr|M1AB56|M1AB56_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400018792}
TAIR10AT1G66350.12E-46RGA-like 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene16318961633488+
GWHAAZE00000001mRNA16318961633488+
GWHAAZE00000001exon16318961633488+
GWHAAZE00000001CDS16318961633488+
Transcript Sequence

Network for GWHGAAZE000074

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.15GRAS1575281.50E-83
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.653
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.175
SRR3591709Stem2.281
SRR3591710White floral bud0.649
SRR3591711White flower0.204
SRR3591712Green floral bud0.068
SRR3591713Yellow flower1.516
SRP173429 SRR8316895Juvenile bud stage 0.428
SRR8316896Juvenile bud stage 0.162
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.066
SRR8316900Third green stage 0.490
SRR8316901Third green stage 0.628
SRR8316898Complete white stage 0.349
SRR8316899Complete white stage 1.217
SRR8316903Complete white stage 0.357
SRR8316902Silver flowering stage0.638
SRR8316904Silver flowering stage0.363
SRR8316905Silver flowering stage0.043
SRR8316906Gold flowering stage 0.653
SRR8316907Gold flowering stage 0.067
SRR8316908Gold flowering stage 0.658
SRP132670SRR6706286Control0.304
SRR6706287Light intensity 50%0.521
SRR6706288Light intensity 20%0.266
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.110
CNS0095595Whole white alabastrum(diploid) 20.016
CNS0095596Whole white alabastrum(diploid) 30.179
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.065
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.083
CNS0095604Slightly white alabastrum(tetraploid) 10.055
CNS0095605Slightly white alabastrum(tetraploid) 20.222
CNS0095606Slightly white alabastrum(tetraploid) 30.224
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.087
CNS0095609Whole white alabastrum(tetraploid) 30.103
CNS0095610Silvery flower (tetraploid) 10.589
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.203
CNS0095613Golden flower (tetraploid) 11.098
CNS0095614Golden flower (tetraploid) 20.571
CNS0095615Golden flower (tetraploid) 30.034
CRA001975CRR073297Stem 10.523
CRR073298Stem 20.661
CRR073299Stem 30.271
CRR073300Leaf 11.317
CRR073301Leaf 20.455
CRR073302Leaf 30.874
CRR073303Juvenile bud 10.724
CRR073304Juvenile bud 21.974
CRR073305Juvenile bud 30.661
CRR073306Third green 10.583
CRR073307Third green 20.749
CRR073308Third green 30.779
CRR073309Second white 10.362
CRR073310Second white 20.164
CRR073311Second white 30.274
CRR073312Silver flowering 10.714
CRR073313Silver flowering 20.161
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.088
CRR073316Gold flowering 20.017
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.623
CRR073319Tawny withering 20.090
CRR073320Tawny withering 30.256