Gene detail

Detail information of GWHGAAZE000075

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002270605.1	0	PREDICTED: histone-lysine N-methyltransferase EZA1 isoform X1 [Vitis vinifera]
Swissprot	tr\|Q8S4P4\|EZ3_MAIZE	8E-163	Histone-lysine N-methyltransferase EZ3
trEMBL	tr\|F6HZA1\|F6HZA1_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB60016.1}
TAIR10	AT4G02020.1	2E-64	SET domain-containing protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	1659072	1670422	+
GWHAAZE00000001	mRNA	1659072	1670422	+
GWHAAZE00000001	exon	1659072	1659110	+
GWHAAZE00000001	exon	1659797	1659880	+
GWHAAZE00000001	exon	1660478	1660815	+
GWHAAZE00000001	exon	1661045	1661105	+
GWHAAZE00000001	exon	1662048	1662214	+
GWHAAZE00000001	exon	1662976	1663060	+
GWHAAZE00000001	exon	1663224	1663379	+
GWHAAZE00000001	exon	1663493	1663540	+
GWHAAZE00000001	exon	1663626	1663697	+
GWHAAZE00000001	exon	1664685	1664802	+
GWHAAZE00000001	exon	1664923	1665339	+
GWHAAZE00000001	exon	1665515	1665575	+
GWHAAZE00000001	exon	1666665	1666815	+
GWHAAZE00000001	exon	1667905	1668034	+
GWHAAZE00000001	exon	1668485	1668616	+
GWHAAZE00000001	exon	1668983	1669050	+
GWHAAZE00000001	exon	1669159	1669206	+
GWHAAZE00000001	exon	1670053	1670130	+
GWHAAZE00000001	exon	1670205	1670422	+
GWHAAZE00000001	CDS	1659072	1659110	+
GWHAAZE00000001	CDS	1659797	1659880	+
GWHAAZE00000001	CDS	1660478	1660815	+
GWHAAZE00000001	CDS	1661045	1661105	+
GWHAAZE00000001	CDS	1662048	1662214	+
GWHAAZE00000001	CDS	1662976	1663060	+
GWHAAZE00000001	CDS	1663224	1663379	+
GWHAAZE00000001	CDS	1663493	1663540	+
GWHAAZE00000001	CDS	1663626	1663697	+
GWHAAZE00000001	CDS	1664685	1664802	+
GWHAAZE00000001	CDS	1664923	1665339	+
GWHAAZE00000001	CDS	1665515	1665575	+
GWHAAZE00000001	CDS	1666665	1666815	+
GWHAAZE00000001	CDS	1667905	1668034	+
GWHAAZE00000001	CDS	1668485	1668616	+
GWHAAZE00000001	CDS	1668983	1669050	+
GWHAAZE00000001	CDS	1669159	1669206	+
GWHAAZE00000001	CDS	1670053	1670130	+
GWHAAZE00000001	CDS	1670205	1670399	+
GWHAAZE00000001	three_prime_UTR	1670400	1670422	+

Transcript Sequence
>GWHTAAZE000075 ATGGTCTCCAACCCAAGCGATTTCGCATCTAAATCCAAAGTGACAGATGTTTCGGGAACCTTAACTTATAAGATACATCAACTGGAAAAGCAGATTCAGGCAGACAGGATTTTTACAATTAAACATTATGCTGTTCCTGATACTGGAACTTATGCAAGTATTTCGTGTTTATTTGTTGCCAAGGAAAAACTTGAGAAGAACAGAAAGAAGCTAGAAAGTCACATTTCTCAGCTTTTGCCAGGAACGCCATCAAAAGATGATGTTTCATCAATGGAGAACAACGGTTTTGGTGAAATGCTCTCTTCGAGAATTAAAAATCCTCTCTCCCAATTTAGTGGGCTTGCTCAAGGATTGGGAGACAAAGACTACGTCAACAGCCAAGAAGTTGTGTCTTTGATTAGTGCCAAGCTTCCAATTATAGAGAAGATACCACCTTATACTACTTGGATTTTCTTGGACAGAAAAAGTGGAGTTAATGCACAGGAATGCTATGAGTTCGTCCTTTGGCATGTTAAAGGCCAACACAGAAACCAGAGAATGGCTGAAGACCAATCGGTGGTTGGGAGGAGACGTATATATTACGACAAACACGGCAGTGAAGCGCTGATATGTAGTGATAGTGAAGAAGAGATTGTAGAACCAGAGGAAGAGAAACACGAATTTTCTGAGGCTGAAGATCGTATTCTTTGGATGGTTTCTGAGGAGCATGGACTAAGTGAGGAGGTGCTGAACATATTGACCCAATTTATTGGAGGTACCAATTCAGAAATCCAGGAGCGCTACAACACGCTCAAGGAAAAATATAAAGAAACAGATGACCAGAAGCTTAAATGTCCTGTGAAAGCCGGGCCTGATAGGAGCATATATCTGGACAAAAGCCTTAGTGCTACTTTAGATTCTTTTGATAATCTGTTCTGTCGCCGTTGTTTGGTATTTGACTGTCGTCTGCATGGCTGTTCTCAAAGTCAATTTGACTCGAGTGAAAAGCAGTACTACTCATCAGAATCTGAAGAAGATGGGAAACCGTGCAGTGATCAATGTTACCTTCGGTTGAGAGCTAGCAAGGACTTGCAAGAAGATATTGCTGTGCATGCCTCACTTAAAATTGGAGGTAAAACCTCAGAAGAGGAATGCCAGATTCCAGTCTCCCTGCATGCTGGTGTGCTAGTAGCTGGTTATGAAAGCACAGGGAAACGCAAGGTCTCCAATCAAACAAATGCAGATTTAGGAGACTCAACACTGGTTTCTGATGACGTACAAGGTTCTTCTAGTAAGAAACAGAAAAAATCATCAGCTGATGAATCCGTTCCTTTGGCTACTGAAGATCAGTATGACCTTTCGAGTTCCAAAAGCGGGGGCCTAAATGTTGGTGCACCCAATAACAGGGATCTCCATATGACAGCAAATAATGCAATAATAATTTCAACCCAGCATGCTTCTGACCAGTTTAGCAGTCCTCTTATTGTTTCTGAGGATAAGAATGAGGAGAATATCACAGGTGAAACACATGGCATTAATAAAGTGCCTATATTAAAGCAGACATCCAGTTCCATGGCAGGACAAGTCAAAAGGGTACTAAGCAGTTGTATATGTGCTGATATCCGATTTCAATTTCTAATGAGGTGTCAAGGTGGTGCCTTCTCATTTTGCCTTATAGCCAGGAACTTACTTTCTGGCTTGAAGACTTGCATAGAGGTTTCGAGTTATATGCATGATGATAGAGCAGCAATGTCTCACGGGGCAATTGATGCATCAAGTTCTTTTTCGGAAGACGATGGAAAAGCTGATGCAGATCAGGAGCAGGAGTTACCAGCTAGATCACGATTACTTCGTAGAAGGGGCAGAGCTCGGAAGCTCAAATATTCTTGGAAGTCTGCTGGCCACCCATCAATCTGGAGAAGAATTGCTGATGGGAAAAACCAGTCCTGTGCTCCAAAAGCTGCAAAAATCGGTTCAGAGGATGCCATTGTGCAAAGAGTCAATGCAGAAGCAGGCAATGCCCATGCTTCGCTGCTGGACGTGAATGTGACCCAGATGTCTGCCGAAATTGCTGGGTTAGGCGAGCCACCTAGAAGAGGAGATGGACAATGTGGGAACATGAGGCTCCTTCTAAGGCAGCAGCAAAGGATCCTCTTGGCGAAATCTGATGTTGCTGGATGGGGCGCCTTTCTAAAGTATGTACTTGATGCTTACCGCAAAGGAGACAAACTGAAATTTGCTAACCACTCATCAAACCCCAACTGTTATGCAAAGGTGATGCTGGTAGCTGGCGATCATCGAGTTGGCATTTTTGCCAACGAGCATATTGAAGCCAGTGAGGAGCTCTTCTATGATTATCGTTATGGACCTGATCAAGCACCTATATGGGCTCGGAAACCTGACGGTTCAAAGGGAGATGACTTGCCAATCCATCAAGGTCGAGCAAAGAAACACCAATCTCATTTGTAAAACCAGCATCACGTTGTTGGTTG

Network for GWHGAAZE000075

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00856.29	SET	721	779	1.70E-08

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	SET

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	molecular_function	protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	13.822
	SRR3591706	second leaf	9.735
	SRR3591707	mature leaf	14.814
	SRR3591708	Shoot apex	12.971
	SRR3591709	Stem	24.892
	SRR3591710	White floral bud	20.987
	SRR3591711	White flower	20.988
	SRR3591712	Green floral bud	21.238
	SRR3591713	Yellow flower	20.598
SRP173429	SRR8316895	Juvenile bud stage	11.169
	SRR8316896	Juvenile bud stage	14.805
	SRR8316897	Juvenile bud stage	8.098
	SRR8316894	Third green stage	6.660
	SRR8316900	Third green stage	16.567
	SRR8316901	Third green stage	18.926
	SRR8316898	Complete white stage	9.835
	SRR8316899	Complete white stage	28.799
	SRR8316903	Complete white stage	16.919
	SRR8316902	Silver flowering stage	8.182
	SRR8316904	Silver flowering stage	14.268
	SRR8316905	Silver flowering stage	6.053
	SRR8316906	Gold flowering stage	20.781
	SRR8316907	Gold flowering stage	17.634
	SRR8316908	Gold flowering stage	21.744
SRP132670	SRR6706286	Control	13.756
	SRR6706287	Light intensity 50%	14.404
	SRR6706288	Light intensity 20%	15.379
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	9.505
	CNS0095593	Slightly white alabastrum(diploid) 2	10.814
	CNS0095594	Slightly white alabastrum(diploid) 3	9.389
	CNS0095595	Whole white alabastrum(diploid) 2	9.614
	CNS0095596	Whole white alabastrum(diploid) 3	7.784
	CNS0095597	Whole white alabastrum(diploid) 4	7.519
	CNS0095598	Silvery flower (diploied) 1	13.739
	CNS0095599	Silvery flower (diploied) 2	10.109
	CNS0095600	Silvery flower (diploied) 3	21.575
	CNS0095601	Golden flower (diploid) 1	11.713
	CNS0095602	Golden flower (diploid) 2	20.260
	CNS0095603	Golden flower (diploid) 3	17.751
	CNS0095604	Slightly white alabastrum(tetraploid) 1	10.732
	CNS0095605	Slightly white alabastrum(tetraploid) 2	8.478
	CNS0095606	Slightly white alabastrum(tetraploid) 3	20.631
	CNS0095607	Whole white alabastrum(tetraploid) 1	6.908
	CNS0095608	Whole white alabastrum(tetraploid) 2	6.375
	CNS0095609	Whole white alabastrum(tetraploid) 3	15.795
	CNS0095610	Silvery flower (tetraploid) 1	22.393
	CNS0095611	Silvery flower (tetraploid) 2	25.555
	CNS0095612	Silvery flower (tetraploid) 3	17.837
	CNS0095613	Golden flower (tetraploid) 1	9.551
	CNS0095614	Golden flower (tetraploid) 2	16.681
	CNS0095615	Golden flower (tetraploid) 3	13.675
CRA001975	CRR073297	Stem 1	18.892
	CRR073298	Stem 2	17.356
	CRR073299	Stem 3	12.609
	CRR073300	Leaf 1	25.340
	CRR073301	Leaf 2	22.745
	CRR073302	Leaf 3	14.340
	CRR073303	Juvenile bud 1	15.529
	CRR073304	Juvenile bud 2	12.279
	CRR073305	Juvenile bud 3	20.463
	CRR073306	Third green 1	6.074
	CRR073307	Third green 2	5.813
	CRR073308	Third green 3	6.836
	CRR073309	Second white 1	6.997
	CRR073310	Second white 2	7.644
	CRR073311	Second white 3	5.754
	CRR073312	Silver flowering 1	3.196
	CRR073313	Silver flowering 2	2.755
	CRR073314	Silver flowering 3	3.747
	CRR073315	Gold flowering 1	13.260
	CRR073316	Gold flowering 2	19.781
	CRR073317	Gold flowering 3	12.572
	CRR073318	Tawny withering 1	13.374
	CRR073319	Tawny withering 2	14.676
	CRR073320	Tawny withering 3	10.340