Detail information of GWHGAAZE000097


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007051053.17.55187E-45Uncharacterized protein isoform 2 [Theobroma cacao]
trEMBLtr|A0A061DRA0|A0A061DRA0_THECC3E-45Uncharacterized protein isoform 2 {ECO:0000313|EMBL:EOX95210.1}
TAIR10AT5G47900.63E-28Protein of unknown function (DUF1624)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene20496102053369-
GWHAAZE00000001mRNA20496102053369-
GWHAAZE00000001exon20533232053369-
GWHAAZE00000001exon20524242052556-
GWHAAZE00000001exon20520272052143-
GWHAAZE00000001exon20518352051926-
GWHAAZE00000001exon20496102049794-
GWHAAZE00000001CDS20533232053369-
GWHAAZE00000001CDS20524242052556-
GWHAAZE00000001CDS20520272052143-
GWHAAZE00000001CDS20518702051926-
GWHAAZE00000001three_prime_UTR20518352051869-
GWHAAZE00000001three_prime_UTR20496102049794-
Transcript Sequence

Network for GWHGAAZE000097

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10532HGSNAT Metabolic pathways map01100
Glycosaminoglycan degradationmap00531
Lysosomemap04142

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.796
SRR3591706second leaf0.857
SRR3591707mature leaf1.365
SRR3591708Shoot apex0.803
SRR3591709Stem1.226
SRR3591710White floral bud0.515
SRR3591711White flower1.293
SRR3591712Green floral bud1.115
SRR3591713Yellow flower1.268
SRP173429 SRR8316895Juvenile bud stage 0.560
SRR8316896Juvenile bud stage 0.666
SRR8316897Juvenile bud stage 0.883
SRR8316894Third green stage 0.598
SRR8316900Third green stage 1.653
SRR8316901Third green stage 2.171
SRR8316898Complete white stage 0.647
SRR8316899Complete white stage 2.563
SRR8316903Complete white stage 2.137
SRR8316902Silver flowering stage0.250
SRR8316904Silver flowering stage2.433
SRR8316905Silver flowering stage0.305
SRR8316906Gold flowering stage 2.091
SRR8316907Gold flowering stage 1.421
SRR8316908Gold flowering stage 1.613
SRP132670SRR6706286Control1.330
SRR6706287Light intensity 50%0.579
SRR6706288Light intensity 20%1.172
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.961
CNS0095593Slightly white alabastrum(diploid) 21.824
CNS0095594Slightly white alabastrum(diploid) 32.606
CNS0095595Whole white alabastrum(diploid) 21.852
CNS0095596Whole white alabastrum(diploid) 31.150
CNS0095597Whole white alabastrum(diploid) 41.080
CNS0095598Silvery flower (diploied) 11.238
CNS0095599Silvery flower (diploied) 21.637
CNS0095600Silvery flower (diploied) 32.543
CNS0095601Golden flower (diploid) 11.479
CNS0095602Golden flower (diploid) 20.742
CNS0095603Golden flower (diploid) 31.322
CNS0095604Slightly white alabastrum(tetraploid) 10.842
CNS0095605Slightly white alabastrum(tetraploid) 20.810
CNS0095606Slightly white alabastrum(tetraploid) 30.471
CNS0095607Whole white alabastrum(tetraploid) 10.705
CNS0095608Whole white alabastrum(tetraploid) 21.697
CNS0095609Whole white alabastrum(tetraploid) 30.729
CNS0095610Silvery flower (tetraploid) 12.264
CNS0095611Silvery flower (tetraploid) 20.762
CNS0095612Silvery flower (tetraploid) 31.209
CNS0095613Golden flower (tetraploid) 11.838
CNS0095614Golden flower (tetraploid) 22.188
CNS0095615Golden flower (tetraploid) 31.242
CRA001975CRR073297Stem 10.285
CRR073298Stem 20.623
CRR073299Stem 30.169
CRR073300Leaf 10.432
CRR073301Leaf 21.605
CRR073302Leaf 30.007
CRR073303Juvenile bud 10.789
CRR073304Juvenile bud 21.048
CRR073305Juvenile bud 30.165
CRR073306Third green 10.062
CRR073307Third green 20.000
CRR073308Third green 30.070
CRR073309Second white 10.441
CRR073310Second white 20.657
CRR073311Second white 30.055
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.117
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.009
CRR073318Tawny withering 10.533
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.421