Detail information of GWHGAAZE000098


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009775935.13.02401E-16PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Nicotiana sylvestris]
trEMBLtr|A0A067K8W8|A0A067K8W8_JATCU1E-15Uncharacterized protein {ECO:0000313|EMBL:KDP28224.1}
TAIR10AT5G47900.13E-10Protein of unknown function (DUF1624)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene20537502056267-
GWHAAZE00000001mRNA20537502056267-
GWHAAZE00000001exon20560522056267-
GWHAAZE00000001exon20555952055735-
GWHAAZE00000001exon20553482055435-
GWHAAZE00000001exon20537502053823-
GWHAAZE00000001five_prime_UTR20562462056267-
GWHAAZE00000001CDS20560522056245-
GWHAAZE00000001CDS20556092055735-
GWHAAZE00000001three_prime_UTR20555952055608-
GWHAAZE00000001three_prime_UTR20553482055435-
GWHAAZE00000001three_prime_UTR20537502053823-
Transcript Sequence

Network for GWHGAAZE000098

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10532HGSNAT Metabolic pathways map01100
Glycosaminoglycan degradationmap00531
Lysosomemap04142

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.130
SRR3591706second leaf0.610
SRR3591707mature leaf2.470
SRR3591708Shoot apex0.840
SRR3591709Stem2.263
SRR3591710White floral bud1.646
SRR3591711White flower1.302
SRR3591712Green floral bud0.755
SRR3591713Yellow flower0.968
SRP173429 SRR8316895Juvenile bud stage 0.964
SRR8316896Juvenile bud stage 1.827
SRR8316897Juvenile bud stage 1.585
SRR8316894Third green stage 0.949
SRR8316900Third green stage 1.488
SRR8316901Third green stage 1.911
SRR8316898Complete white stage 1.436
SRR8316899Complete white stage 2.968
SRR8316903Complete white stage 2.666
SRR8316902Silver flowering stage0.737
SRR8316904Silver flowering stage1.352
SRR8316905Silver flowering stage0.976
SRR8316906Gold flowering stage 2.808
SRR8316907Gold flowering stage 3.076
SRR8316908Gold flowering stage 2.517
SRP132670SRR6706286Control1.487
SRR6706287Light intensity 50%0.857
SRR6706288Light intensity 20%1.529
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.705
CNS0095593Slightly white alabastrum(diploid) 20.722
CNS0095594Slightly white alabastrum(diploid) 31.208
CNS0095595Whole white alabastrum(diploid) 22.202
CNS0095596Whole white alabastrum(diploid) 34.131
CNS0095597Whole white alabastrum(diploid) 41.028
CNS0095598Silvery flower (diploied) 11.581
CNS0095599Silvery flower (diploied) 20.555
CNS0095600Silvery flower (diploied) 33.075
CNS0095601Golden flower (diploid) 11.502
CNS0095602Golden flower (diploid) 22.246
CNS0095603Golden flower (diploid) 32.058
CNS0095604Slightly white alabastrum(tetraploid) 11.449
CNS0095605Slightly white alabastrum(tetraploid) 21.318
CNS0095606Slightly white alabastrum(tetraploid) 30.712
CNS0095607Whole white alabastrum(tetraploid) 11.868
CNS0095608Whole white alabastrum(tetraploid) 21.597
CNS0095609Whole white alabastrum(tetraploid) 31.405
CNS0095610Silvery flower (tetraploid) 15.778
CNS0095611Silvery flower (tetraploid) 22.088
CNS0095612Silvery flower (tetraploid) 32.361
CNS0095613Golden flower (tetraploid) 12.943
CNS0095614Golden flower (tetraploid) 23.408
CNS0095615Golden flower (tetraploid) 32.319
CRA001975CRR073297Stem 11.686
CRR073298Stem 21.562
CRR073299Stem 30.102
CRR073300Leaf 11.082
CRR073301Leaf 20.848
CRR073302Leaf 31.585
CRR073303Juvenile bud 11.622
CRR073304Juvenile bud 20.130
CRR073305Juvenile bud 31.407
CRR073306Third green 10.362
CRR073307Third green 20.266
CRR073308Third green 30.428
CRR073309Second white 10.138
CRR073310Second white 20.084
CRR073311Second white 30.487
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.135
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.040
CRR073317Gold flowering 30.000
CRR073318Tawny withering 12.166
CRR073319Tawny withering 20.196
CRR073320Tawny withering 30.000