Detail information of GWHGAAZE000130


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI32868.36.98802E-93unnamed protein product [Vitis vinifera]
Swissprottr|Q8GWR1|AAAS_ARATH3E-81Aladin {ECO:0000303|PubMed:21189294}
trEMBLtr|D7TQ61|D7TQ61_VITVI3E-93Putative uncharacterized protein {ECO:0000313|EMBL:CBI32868.3}
TAIR10AT3G56900.11E-67Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene23791342387195-
GWHAAZE00000001mRNA23791342387195-
GWHAAZE00000001exon23791342379520-
GWHAAZE00000001exon23803322380399-
GWHAAZE00000001exon23808962381011-
GWHAAZE00000001exon23816202381757-
GWHAAZE00000001exon23832692383320-
GWHAAZE00000001exon23837172383816-
GWHAAZE00000001exon23871002387195-
GWHAAZE00000001CDS23871002387195-
GWHAAZE00000001CDS23837172383816-
GWHAAZE00000001CDS23832692383320-
GWHAAZE00000001CDS23816202381757-
GWHAAZE00000001CDS23808962381011-
GWHAAZE00000001CDS23803322380399-
GWHAAZE00000001CDS23794492379520-
GWHAAZE00000001three_prime_UTR23791342379448-
Transcript Sequence

Network for GWHGAAZE000130

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14320AAAS RNA transport map03013

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.942
SRR3591706second leaf6.243
SRR3591707mature leaf9.144
SRR3591708Shoot apex20.137
SRR3591709Stem14.012
SRR3591710White floral bud7.815
SRR3591711White flower13.344
SRR3591712Green floral bud10.671
SRR3591713Yellow flower12.460
SRP173429 SRR8316895Juvenile bud stage 25.454
SRR8316896Juvenile bud stage 40.561
SRR8316897Juvenile bud stage 15.248
SRR8316894Third green stage 9.952
SRR8316900Third green stage 20.940
SRR8316901Third green stage 20.458
SRR8316898Complete white stage 5.097
SRR8316899Complete white stage 25.015
SRR8316903Complete white stage 6.965
SRR8316902Silver flowering stage5.039
SRR8316904Silver flowering stage5.111
SRR8316905Silver flowering stage3.343
SRR8316906Gold flowering stage 11.888
SRR8316907Gold flowering stage 9.701
SRR8316908Gold flowering stage 11.639
SRP132670SRR6706286Control11.841
SRR6706287Light intensity 50%11.147
SRR6706288Light intensity 20%13.271
CNP0000432CNS0095592Slightly white alabastrum(diploid) 121.682
CNS0095593Slightly white alabastrum(diploid) 217.978
CNS0095594Slightly white alabastrum(diploid) 326.375
CNS0095595Whole white alabastrum(diploid) 214.117
CNS0095596Whole white alabastrum(diploid) 317.729
CNS0095597Whole white alabastrum(diploid) 415.246
CNS0095598Silvery flower (diploied) 115.887
CNS0095599Silvery flower (diploied) 213.569
CNS0095600Silvery flower (diploied) 311.779
CNS0095601Golden flower (diploid) 111.934
CNS0095602Golden flower (diploid) 210.648
CNS0095603Golden flower (diploid) 310.072
CNS0095604Slightly white alabastrum(tetraploid) 116.132
CNS0095605Slightly white alabastrum(tetraploid) 215.886
CNS0095606Slightly white alabastrum(tetraploid) 318.616
CNS0095607Whole white alabastrum(tetraploid) 19.884
CNS0095608Whole white alabastrum(tetraploid) 29.462
CNS0095609Whole white alabastrum(tetraploid) 313.844
CNS0095610Silvery flower (tetraploid) 113.589
CNS0095611Silvery flower (tetraploid) 216.416
CNS0095612Silvery flower (tetraploid) 313.075
CNS0095613Golden flower (tetraploid) 110.641
CNS0095614Golden flower (tetraploid) 213.442
CNS0095615Golden flower (tetraploid) 39.967
CRA001975CRR073297Stem 130.083
CRR073298Stem 222.695
CRR073299Stem 328.437
CRR073300Leaf 117.716
CRR073301Leaf 216.499
CRR073302Leaf 313.867
CRR073303Juvenile bud 116.255
CRR073304Juvenile bud 210.019
CRR073305Juvenile bud 315.391
CRR073306Third green 12.820
CRR073307Third green 24.524
CRR073308Third green 33.738
CRR073309Second white 16.551
CRR073310Second white 26.514
CRR073311Second white 35.746
CRR073312Silver flowering 13.142
CRR073313Silver flowering 24.881
CRR073314Silver flowering 34.538
CRR073315Gold flowering 19.714
CRR073316Gold flowering 213.800
CRR073317Gold flowering 310.911
CRR073318Tawny withering 112.372
CRR073319Tawny withering 212.850
CRR073320Tawny withering 314.980