Detail information of GWHGAAZE000206


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKHG03726.10Gibberellin receptor GID1B -like protein [Gossypium arboreum]
COGYP_001838072.15E-29putative triacylglycerol lipase
Swissprottr|Q9LYC1|GID1B_ARATH0Gibberellin receptor GID1B
trEMBLtr|Q0PIN1|Q0PIN1_GOSHI0Gibberellic acid receptor {ECO:0000313|EMBL:ABG89394.1}
TAIR10AT3G63010.12E-152alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene41372014138750+
GWHAAZE00000001mRNA41372014138750+
GWHAAZE00000001exon41372014137239+
GWHAAZE00000001exon41377494138750+
GWHAAZE00000001CDS41372014137239+
GWHAAZE00000001CDS41377494138750+
Transcript Sequence

Network for GWHGAAZE000206

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07859.14Abhydrolase_31083211.20E-57
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14493GID1 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0016787molecular_functionhydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf10.724
SRR3591706second leaf2.744
SRR3591707mature leaf9.039
SRR3591708Shoot apex7.316
SRR3591709Stem33.750
SRR3591710White floral bud37.418
SRR3591711White flower103.539
SRR3591712Green floral bud10.330
SRR3591713Yellow flower126.478
SRP173429 SRR8316895Juvenile bud stage 3.867
SRR8316896Juvenile bud stage 5.864
SRR8316897Juvenile bud stage 2.652
SRR8316894Third green stage 2.078
SRR8316900Third green stage 4.772
SRR8316901Third green stage 4.448
SRR8316898Complete white stage 12.843
SRR8316899Complete white stage 10.123
SRR8316903Complete white stage 18.198
SRR8316902Silver flowering stage22.167
SRR8316904Silver flowering stage32.641
SRR8316905Silver flowering stage15.322
SRR8316906Gold flowering stage 79.840
SRR8316907Gold flowering stage 75.765
SRR8316908Gold flowering stage 89.722
SRP132670SRR6706286Control8.780
SRR6706287Light intensity 50%8.496
SRR6706288Light intensity 20%6.194
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.711
CNS0095593Slightly white alabastrum(diploid) 24.379
CNS0095594Slightly white alabastrum(diploid) 35.559
CNS0095595Whole white alabastrum(diploid) 24.758
CNS0095596Whole white alabastrum(diploid) 33.785
CNS0095597Whole white alabastrum(diploid) 46.155
CNS0095598Silvery flower (diploied) 120.216
CNS0095599Silvery flower (diploied) 215.842
CNS0095600Silvery flower (diploied) 355.061
CNS0095601Golden flower (diploid) 125.300
CNS0095602Golden flower (diploid) 280.710
CNS0095603Golden flower (diploid) 376.934
CNS0095604Slightly white alabastrum(tetraploid) 14.746
CNS0095605Slightly white alabastrum(tetraploid) 24.874
CNS0095606Slightly white alabastrum(tetraploid) 36.729
CNS0095607Whole white alabastrum(tetraploid) 14.635
CNS0095608Whole white alabastrum(tetraploid) 23.175
CNS0095609Whole white alabastrum(tetraploid) 35.066
CNS0095610Silvery flower (tetraploid) 140.035
CNS0095611Silvery flower (tetraploid) 240.574
CNS0095612Silvery flower (tetraploid) 368.283
CNS0095613Golden flower (tetraploid) 147.693
CNS0095614Golden flower (tetraploid) 254.047
CNS0095615Golden flower (tetraploid) 380.289
CRA001975CRR073297Stem 19.365
CRR073298Stem 29.182
CRR073299Stem 39.249
CRR073300Leaf 17.090
CRR073301Leaf 26.186
CRR073302Leaf 36.045
CRR073303Juvenile bud 15.851
CRR073304Juvenile bud 217.514
CRR073305Juvenile bud 39.898
CRR073306Third green 137.444
CRR073307Third green 237.522
CRR073308Third green 341.055
CRR073309Second white 181.058
CRR073310Second white 263.253
CRR073311Second white 360.710
CRR073312Silver flowering 1108.339
CRR073313Silver flowering 2129.117
CRR073314Silver flowering 3112.386
CRR073315Gold flowering 111.037
CRR073316Gold flowering 211.491
CRR073317Gold flowering 314.361
CRR073318Tawny withering 140.217
CRR073319Tawny withering 241.272
CRR073320Tawny withering 324.282