Detail information of GWHGAAZE000286


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011079928.10PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic isoform X1 [Sesamum indicum]
COGNP_069348.14E-44chloroplast inner envelope membrane protein
Swissprottr|P23525|IN37_SPIOL02-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic (Precursor)
trEMBLtr|B7X938|B7X938_HEVBR02-methyl-6-phytylbenzoquinone methyltranferase {ECO:0000313|EMBL:BAH10641.1}
TAIR10AT3G63410.11E-142S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene56365715641232-
GWHAAZE00000001mRNA56365715641232-
GWHAAZE00000001exon56365715636726-
GWHAAZE00000001exon56393085639614-
GWHAAZE00000001exon56406795641232-
GWHAAZE00000001CDS56406795641232-
GWHAAZE00000001CDS56393085639614-
GWHAAZE00000001CDS56365715636726-
Transcript Sequence

Network for GWHGAAZE000286

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08241.13Methyltransf_111162102.50E-17
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K12502VTE3, APG1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Ubiquinone and other terpenoid-quinone biosynthesismap00130

Gene Ontology

GO term OntologyName
GO:0032259biological_processmethylation
GO:0008168molecular_functionmethyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf246.774
SRR3591706second leaf337.610
SRR3591707mature leaf375.884
SRR3591708Shoot apex232.489
SRR3591709Stem208.287
SRR3591710White floral bud206.265
SRR3591711White flower195.400
SRR3591712Green floral bud199.183
SRR3591713Yellow flower256.870
SRP173429 SRR8316895Juvenile bud stage 126.226
SRR8316896Juvenile bud stage 143.879
SRR8316897Juvenile bud stage 74.664
SRR8316894Third green stage 63.557
SRR8316900Third green stage 257.547
SRR8316901Third green stage 212.582
SRR8316898Complete white stage 104.165
SRR8316899Complete white stage 265.839
SRR8316903Complete white stage 137.738
SRR8316902Silver flowering stage74.204
SRR8316904Silver flowering stage92.517
SRR8316905Silver flowering stage59.441
SRR8316906Gold flowering stage 181.866
SRR8316907Gold flowering stage 149.362
SRR8316908Gold flowering stage 197.708
SRP132670SRR6706286Control127.371
SRR6706287Light intensity 50%130.156
SRR6706288Light intensity 20%142.167
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1150.752
CNS0095593Slightly white alabastrum(diploid) 2153.157
CNS0095594Slightly white alabastrum(diploid) 3119.994
CNS0095595Whole white alabastrum(diploid) 2139.916
CNS0095596Whole white alabastrum(diploid) 3157.574
CNS0095597Whole white alabastrum(diploid) 4132.267
CNS0095598Silvery flower (diploied) 1170.764
CNS0095599Silvery flower (diploied) 2177.407
CNS0095600Silvery flower (diploied) 3199.484
CNS0095601Golden flower (diploid) 1153.152
CNS0095602Golden flower (diploid) 2199.770
CNS0095603Golden flower (diploid) 3190.751
CNS0095604Slightly white alabastrum(tetraploid) 1160.543
CNS0095605Slightly white alabastrum(tetraploid) 2146.747
CNS0095606Slightly white alabastrum(tetraploid) 3250.119
CNS0095607Whole white alabastrum(tetraploid) 192.853
CNS0095608Whole white alabastrum(tetraploid) 2123.362
CNS0095609Whole white alabastrum(tetraploid) 3234.149
CNS0095610Silvery flower (tetraploid) 1195.374
CNS0095611Silvery flower (tetraploid) 2251.510
CNS0095612Silvery flower (tetraploid) 3216.644
CNS0095613Golden flower (tetraploid) 1164.082
CNS0095614Golden flower (tetraploid) 2199.171
CNS0095615Golden flower (tetraploid) 3171.606
CRA001975CRR073297Stem 1158.426
CRR073298Stem 2149.158
CRR073299Stem 3194.268
CRR073300Leaf 1166.306
CRR073301Leaf 2173.741
CRR073302Leaf 3190.361
CRR073303Juvenile bud 1209.759
CRR073304Juvenile bud 2230.276
CRR073305Juvenile bud 3210.402
CRR073306Third green 1157.222
CRR073307Third green 2107.633
CRR073308Third green 3115.055
CRR073309Second white 1217.028
CRR073310Second white 2135.485
CRR073311Second white 3126.313
CRR073312Silver flowering 1133.709
CRR073313Silver flowering 2157.150
CRR073314Silver flowering 3101.287
CRR073315Gold flowering 1473.264
CRR073316Gold flowering 2506.746
CRR073317Gold flowering 3514.245
CRR073318Tawny withering 1119.516
CRR073319Tawny withering 2103.039
CRR073320Tawny withering 3114.394