Detail information of GWHGAAZE000289


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011082596.10PREDICTED: histone acetyltransferase GCN5 isoform X1 [Sesamum indicum]
Swissprottr|Q9AR19|GCN5_ARATH0Histone acetyltransferase GCN5
trEMBLtr|A0A022PQ82|A0A022PQ82_ERYGU0Uncharacterized protein {ECO:0000313|EMBL:EYU17891.1}
TAIR10AT3G54610.10histone acetyltransferase of the GNAT family 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene56969225704166+
GWHAAZE00000001mRNA56969225704166+
GWHAAZE00000001exon56969225697470+
GWHAAZE00000001exon56980015698065+
GWHAAZE00000001exon56982545698343+
GWHAAZE00000001exon56987675698838+
GWHAAZE00000001exon56994215699589+
GWHAAZE00000001exon56997555699798+
GWHAAZE00000001exon57001055700204+
GWHAAZE00000001exon57003635700431+
GWHAAZE00000001exon57008525700906+
GWHAAZE00000001exon57014365701558+
GWHAAZE00000001exon57021695702227+
GWHAAZE00000001exon57027135702806+
GWHAAZE00000001exon57035625703730+
GWHAAZE00000001exon57041005704166+
GWHAAZE00000001CDS56969225697470+
GWHAAZE00000001CDS56980015698065+
GWHAAZE00000001CDS56982545698343+
GWHAAZE00000001CDS56987675698838+
GWHAAZE00000001CDS56994215699589+
GWHAAZE00000001CDS56997555699798+
GWHAAZE00000001CDS57001055700204+
GWHAAZE00000001CDS57003635700431+
GWHAAZE00000001CDS57008525700906+
GWHAAZE00000001CDS57014365701558+
GWHAAZE00000001CDS57021695702227+
GWHAAZE00000001CDS57027135702806+
GWHAAZE00000001CDS57035625703730+
GWHAAZE00000001CDS57041005704166+
Transcript Sequence

Network for GWHGAAZE000289

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00583.26Acetyltransf_12393178.20E-09
PF00439.26Bromodomain4675438.20E-22
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGNAT

KEGG pathway

KO Enzyme pathway mapID
K06062PCAF, KAT2, GCN5 Notch signaling pathway map04330
Thyroid hormone signaling pathwaymap04919

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding
GO:0008080molecular_functionN-acetyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf32.593
SRR3591706second leaf18.050
SRR3591707mature leaf15.353
SRR3591708Shoot apex39.365
SRR3591709Stem26.961
SRR3591710White floral bud28.474
SRR3591711White flower34.850
SRR3591712Green floral bud26.162
SRR3591713Yellow flower31.370
SRP173429 SRR8316895Juvenile bud stage 25.651
SRR8316896Juvenile bud stage 29.665
SRR8316897Juvenile bud stage 16.981
SRR8316894Third green stage 11.591
SRR8316900Third green stage 38.746
SRR8316901Third green stage 32.397
SRR8316898Complete white stage 14.881
SRR8316899Complete white stage 45.838
SRR8316903Complete white stage 24.657
SRR8316902Silver flowering stage18.868
SRR8316904Silver flowering stage23.694
SRR8316905Silver flowering stage12.851
SRR8316906Gold flowering stage 47.365
SRR8316907Gold flowering stage 41.613
SRR8316908Gold flowering stage 43.305
SRP132670SRR6706286Control37.013
SRR6706287Light intensity 50%36.860
SRR6706288Light intensity 20%38.526
CNP0000432CNS0095592Slightly white alabastrum(diploid) 124.118
CNS0095593Slightly white alabastrum(diploid) 224.409
CNS0095594Slightly white alabastrum(diploid) 322.258
CNS0095595Whole white alabastrum(diploid) 221.869
CNS0095596Whole white alabastrum(diploid) 319.369
CNS0095597Whole white alabastrum(diploid) 420.074
CNS0095598Silvery flower (diploied) 138.007
CNS0095599Silvery flower (diploied) 233.318
CNS0095600Silvery flower (diploied) 339.133
CNS0095601Golden flower (diploid) 132.620
CNS0095602Golden flower (diploid) 235.653
CNS0095603Golden flower (diploid) 336.661
CNS0095604Slightly white alabastrum(tetraploid) 125.055
CNS0095605Slightly white alabastrum(tetraploid) 222.405
CNS0095606Slightly white alabastrum(tetraploid) 348.796
CNS0095607Whole white alabastrum(tetraploid) 116.840
CNS0095608Whole white alabastrum(tetraploid) 217.098
CNS0095609Whole white alabastrum(tetraploid) 335.159
CNS0095610Silvery flower (tetraploid) 147.245
CNS0095611Silvery flower (tetraploid) 251.350
CNS0095612Silvery flower (tetraploid) 345.741
CNS0095613Golden flower (tetraploid) 131.705
CNS0095614Golden flower (tetraploid) 238.947
CNS0095615Golden flower (tetraploid) 336.230
CRA001975CRR073297Stem 137.733
CRR073298Stem 237.365
CRR073299Stem 334.570
CRR073300Leaf 133.139
CRR073301Leaf 236.462
CRR073302Leaf 331.006
CRR073303Juvenile bud 124.189
CRR073304Juvenile bud 223.404
CRR073305Juvenile bud 331.347
CRR073306Third green 112.161
CRR073307Third green 28.306
CRR073308Third green 312.626
CRR073309Second white 117.969
CRR073310Second white 218.310
CRR073311Second white 317.074
CRR073312Silver flowering 112.379
CRR073313Silver flowering 212.582
CRR073314Silver flowering 312.868
CRR073315Gold flowering 123.098
CRR073316Gold flowering 231.052
CRR073317Gold flowering 317.905
CRR073318Tawny withering 133.926
CRR073319Tawny withering 227.308
CRR073320Tawny withering 330.902