Detail information of GWHGAAZE000294


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010278166.11.12419E-87PREDICTED: auxin-responsive protein IAA4-like [Nelumbo nucifera]
Swissprottr|O24542|AX22D_VIGRR9E-81Auxin-induced protein 22D
trEMBLtr|A0A061F147|A0A061F147_THECC2E-85Auxin-responsive protein {ECO:0000256|RuleBase:RU004549}
TAIR10AT5G43700.12E-59AUX/IAA transcriptional regulator family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene57454815746345-
GWHAAZE00000001mRNA57454815746345-
GWHAAZE00000001exon57454815745710-
GWHAAZE00000001exon57458035746005-
GWHAAZE00000001exon57461465746345-
GWHAAZE00000001CDS57461465746345-
GWHAAZE00000001CDS57458035746005-
GWHAAZE00000001CDS57454815745710-
Transcript Sequence

Network for GWHGAAZE000294

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02309.17AUX_IAA502068.40E-57
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAUX/IAA

KEGG pathway

KO Enzyme pathway mapID
K14484IAA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf264.389
SRR3591706second leaf75.492
SRR3591707mature leaf28.541
SRR3591708Shoot apex185.770
SRR3591709Stem201.270
SRR3591710White floral bud267.828
SRR3591711White flower274.883
SRR3591712Green floral bud185.740
SRR3591713Yellow flower240.749
SRP173429 SRR8316895Juvenile bud stage 140.088
SRR8316896Juvenile bud stage 171.851
SRR8316897Juvenile bud stage 82.556
SRR8316894Third green stage 73.507
SRR8316900Third green stage 204.248
SRR8316901Third green stage 267.362
SRR8316898Complete white stage 179.741
SRR8316899Complete white stage 561.833
SRR8316903Complete white stage 276.816
SRR8316902Silver flowering stage232.592
SRR8316904Silver flowering stage248.386
SRR8316905Silver flowering stage165.721
SRR8316906Gold flowering stage 488.902
SRR8316907Gold flowering stage 409.131
SRR8316908Gold flowering stage 419.193
SRP132670SRR6706286Control374.282
SRR6706287Light intensity 50%377.003
SRR6706288Light intensity 20%364.297
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1165.794
CNS0095593Slightly white alabastrum(diploid) 2212.694
CNS0095594Slightly white alabastrum(diploid) 3172.856
CNS0095595Whole white alabastrum(diploid) 2165.682
CNS0095596Whole white alabastrum(diploid) 3127.953
CNS0095597Whole white alabastrum(diploid) 4167.547
CNS0095598Silvery flower (diploied) 1243.822
CNS0095599Silvery flower (diploied) 2157.413
CNS0095600Silvery flower (diploied) 3216.940
CNS0095601Golden flower (diploid) 1174.453
CNS0095602Golden flower (diploid) 2236.656
CNS0095603Golden flower (diploid) 3232.177
CNS0095604Slightly white alabastrum(tetraploid) 1130.563
CNS0095605Slightly white alabastrum(tetraploid) 2101.930
CNS0095606Slightly white alabastrum(tetraploid) 3276.784
CNS0095607Whole white alabastrum(tetraploid) 179.790
CNS0095608Whole white alabastrum(tetraploid) 275.831
CNS0095609Whole white alabastrum(tetraploid) 3149.215
CNS0095610Silvery flower (tetraploid) 1174.179
CNS0095611Silvery flower (tetraploid) 2189.318
CNS0095612Silvery flower (tetraploid) 3353.095
CNS0095613Golden flower (tetraploid) 1112.700
CNS0095614Golden flower (tetraploid) 2170.136
CNS0095615Golden flower (tetraploid) 3202.315
CRA001975CRR073297Stem 1292.972
CRR073298Stem 2320.783
CRR073299Stem 3282.373
CRR073300Leaf 1360.329
CRR073301Leaf 2375.063
CRR073302Leaf 3363.405
CRR073303Juvenile bud 1360.644
CRR073304Juvenile bud 2319.188
CRR073305Juvenile bud 3468.025
CRR073306Third green 1339.485
CRR073307Third green 2363.756
CRR073308Third green 3326.053
CRR073309Second white 1213.190
CRR073310Second white 2246.550
CRR073311Second white 3149.497
CRR073312Silver flowering 1149.587
CRR073313Silver flowering 2116.423
CRR073314Silver flowering 3109.503
CRR073315Gold flowering 1133.350
CRR073316Gold flowering 2154.433
CRR073317Gold flowering 3121.501
CRR073318Tawny withering 1161.038
CRR073319Tawny withering 2202.393
CRR073320Tawny withering 3139.065