Gene detail

Detail information of GWHGAAZE000313

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009620147.1	0	PREDICTED: cytochrome P450 94A2-like [Nicotiana tomentosiformis]
COG	YP_004989511.1	4E-37	cytochrome P450
Swissprot	tr\|O81117\|C94A1_VICSA	0	Cytochrome P450 94A1
trEMBL	tr\|A0A068U6D9\|A0A068U6D9_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_11 {ECO:0000313\|EMBL:CDP03714.1}
TAIR10	AT5G63450.1	8E-123	cytochrome P450, family 94, subfamily B, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	6139573	6141442	+
GWHAAZE00000001	mRNA	6139573	6141442	+
GWHAAZE00000001	exon	6139573	6139962	+
GWHAAZE00000001	exon	6140102	6140470	+
GWHAAZE00000001	exon	6140687	6141442	+
GWHAAZE00000001	CDS	6139573	6139962	+
GWHAAZE00000001	CDS	6140102	6140470	+
GWHAAZE00000001	CDS	6140687	6141442	+

Transcript Sequence
>GWHTAAZE000313 ATGTTAGACCTTGAGCTCTCAACTCCACTTCTCTTTTGCATACTTCCCCTAATCTCCTTATTCTTTTTCAAACTCCTCACAAACTTCTCCTCATCATCAAAAAAATCCACTAATTCAAGTCCACCATCATACCCCTTGATCGGTTCTTTTATCGAAATCTTCGTTAACAAAGACCGTCGGATTCAATGGACATCAGATCTTGTCAAAAGCTCGCCTTCCTCCACCGTCGTACTCCAACGCCCTCTCGGGGAAGTTAGCATCCTAACCGCCAATCCCGCAAACGTCCAACACATACTCAAGTCACGATTCGACATCTACCAGAAGGGAGATGGATTCCGGCGAACTCTCTCCGACCTGCTCGGCAACGGAATCTTCAATGCTGACGGTCAGGTGTGGAAGTTCCAACGGCAAGTCTCGAGCCACGAATTTAACACTAAATCTCTGCGTAATTTCGTCGAAAACGTGGTGGACACTGAGCTCAACCAACGCCTTATACCTATCCTCGCTGCTGCTGCATCAAATCAAACAGTTCTCGATTTTCAGGACATTCTTCAGCGATTCGCTTTCGATAATATATGCAAAATCGCTTTCGGTTACGATCCTGCCTATTTGTTACCATCTCTTCCTCAGGCCAAATTCGCCATTGCTTTTGAAGAGGCGGTTAGAATTAGCAGTGACAGGTTCGGAATGATTGTTCCTTTGATCTGGAAAGCTAAGCGACTTCTCAATGTCGGATCTGAAAAACAGCTTAAAATCGCAGTTCGAGAATTCGCCGGACAAATTCTAAGAGAGAAGAAGCAAGAGCTGAAAGAGAAATCAACGCTCGAATCTGTCGATCTCTTGTCTCGATTTTTGAGTTCCGGTCACTCCGACGAGAACTTTGTGACGGATATAGTGATTAGTTTCATACTTGCGGGAAGGGATACCACATCAGCAGCCCTTACGTGGTTCTTCTGGCTAGTCTCCAAAAACAGCGAGGTCGAAAATGAAATTCTCAAGGAGATTAAAGGGAAATCTGGAAATATTTATGATGAAGTAAAGGACATGACTTACACGCACGCTTCACTGTGCGAGAGCATGAGGTTGTACCCTCCGGTCCCCACGGATTCGAAAGAAGCTAGTAGCGACGATGTTTTGCCAGATGGTACCGTTGTGAAGAAGGGAAATAGAGTGGTTTACCATCCCTATGCAATGGGAAGGACTGAAAAGTTGTGGGGATCCGATTGGCCGGAGTTTAAGCCAGATCGGTGGTTGGAGACTGATATGATTACCGGTAAGAGGACGTTTGTGGCGAGGGATTCGTATACTTATCCGGTGTTTCAAGCGGGGCCAAGGATTTGTTTGGGGAAGGAAATGGCCTTTTTGCAGATGAAGAGGGTGGTTGGAAGTGTTTTACGGCGGTTTAAGGTGGTTCCGGTGGTGGAGGAGGGAGGTGGTGAGCCGGTTTTCATGGCTTATTTGACTTCAAAGATGAAAGGAGGGTTGCCGGTGAGGATTGTGGAAAGGGATGTCTGA

Network for GWHGAAZE000313

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	43	472	8.10E-59

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K20769	CYP94A5	Cutin, suberine and wax biosynthesis	map00073

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	2.466
	SRR3591706	second leaf	6.593
	SRR3591707	mature leaf	13.926
	SRR3591708	Shoot apex	6.486
	SRR3591709	Stem	8.001
	SRR3591710	White floral bud	4.853
	SRR3591711	White flower	5.306
	SRR3591712	Green floral bud	4.048
	SRR3591713	Yellow flower	2.138
SRP173429	SRR8316895	Juvenile bud stage	0.938
	SRR8316896	Juvenile bud stage	0.815
	SRR8316897	Juvenile bud stage	0.122
	SRR8316894	Third green stage	0.345
	SRR8316900	Third green stage	0.820
	SRR8316901	Third green stage	0.564
	SRR8316898	Complete white stage	0.256
	SRR8316899	Complete white stage	2.497
	SRR8316903	Complete white stage	0.418
	SRR8316902	Silver flowering stage	1.767
	SRR8316904	Silver flowering stage	3.784
	SRR8316905	Silver flowering stage	3.927
	SRR8316906	Gold flowering stage	6.444
	SRR8316907	Gold flowering stage	7.337
	SRR8316908	Gold flowering stage	7.671
SRP132670	SRR6706286	Control	3.085
	SRR6706287	Light intensity 50%	2.064
	SRR6706288	Light intensity 20%	2.041
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.349
	CNS0095593	Slightly white alabastrum(diploid) 2	2.842
	CNS0095594	Slightly white alabastrum(diploid) 3	1.403
	CNS0095595	Whole white alabastrum(diploid) 2	2.893
	CNS0095596	Whole white alabastrum(diploid) 3	0.529
	CNS0095597	Whole white alabastrum(diploid) 4	1.424
	CNS0095598	Silvery flower (diploied) 1	3.820
	CNS0095599	Silvery flower (diploied) 2	1.275
	CNS0095600	Silvery flower (diploied) 3	2.032
	CNS0095601	Golden flower (diploid) 1	0.963
	CNS0095602	Golden flower (diploid) 2	1.844
	CNS0095603	Golden flower (diploid) 3	2.250
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.433
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.471
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.038
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.620
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.866
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.266
	CNS0095610	Silvery flower (tetraploid) 1	0.460
	CNS0095611	Silvery flower (tetraploid) 2	1.037
	CNS0095612	Silvery flower (tetraploid) 3	0.524
	CNS0095613	Golden flower (tetraploid) 1	0.869
	CNS0095614	Golden flower (tetraploid) 2	0.772
	CNS0095615	Golden flower (tetraploid) 3	0.072
CRA001975	CRR073297	Stem 1	0.345
	CRR073298	Stem 2	0.749
	CRR073299	Stem 3	0.852
	CRR073300	Leaf 1	0.781
	CRR073301	Leaf 2	1.065
	CRR073302	Leaf 3	0.321
	CRR073303	Juvenile bud 1	0.368
	CRR073304	Juvenile bud 2	0.384
	CRR073305	Juvenile bud 3	0.946
	CRR073306	Third green 1	2.372
	CRR073307	Third green 2	6.225
	CRR073308	Third green 3	4.286
	CRR073309	Second white 1	14.810
	CRR073310	Second white 2	2.888
	CRR073311	Second white 3	4.250
	CRR073312	Silver flowering 1	2.822
	CRR073313	Silver flowering 2	2.099
	CRR073314	Silver flowering 3	5.207
	CRR073315	Gold flowering 1	20.054
	CRR073316	Gold flowering 2	30.693
	CRR073317	Gold flowering 3	34.771
	CRR073318	Tawny withering 1	32.809
	CRR073319	Tawny withering 2	29.653
	CRR073320	Tawny withering 3	24.869