Detail information of GWHGAAZE000386


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009803379.10PREDICTED: uncharacterized protein LOC104248763 isoform X2 [Nicotiana sylvestris]
COGYP_001659763.13E-25transcriptional activator
trEMBLtr|A0A067K3R9|A0A067K3R9_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP26459.1}
TAIR10AT5G32470.12E-153Haem oxygenase-like, multi-helical

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene74329707441692-
GWHAAZE00000001mRNA74329707441692-
GWHAAZE00000001exon74415057441692-
GWHAAZE00000001exon74412717441400-
GWHAAZE00000001exon74396097439899-
GWHAAZE00000001exon74390987439515-
GWHAAZE00000001exon74384977438763-
GWHAAZE00000001exon74329707433376-
GWHAAZE00000001CDS74415057441692-
GWHAAZE00000001CDS74412717441400-
GWHAAZE00000001CDS74396097439899-
GWHAAZE00000001CDS74390987439515-
GWHAAZE00000001CDS74384977438763-
GWHAAZE00000001CDS74329707433376-
Transcript Sequence

Network for GWHGAAZE000386

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03070.17TENA_THI-4311362.00E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K22911TH2 Metabolic pathways map01100
Thiamine metabolismmap00730

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf39.388
SRR3591706second leaf9.316
SRR3591707mature leaf9.380
SRR3591708Shoot apex12.118
SRR3591709Stem44.641
SRR3591710White floral bud43.080
SRR3591711White flower27.169
SRR3591712Green floral bud28.875
SRR3591713Yellow flower24.894
SRP173429 SRR8316895Juvenile bud stage 14.740
SRR8316896Juvenile bud stage 18.138
SRR8316897Juvenile bud stage 14.248
SRR8316894Third green stage 6.320
SRR8316900Third green stage 17.829
SRR8316901Third green stage 17.645
SRR8316898Complete white stage 11.855
SRR8316899Complete white stage 24.733
SRR8316903Complete white stage 18.090
SRR8316902Silver flowering stage9.442
SRR8316904Silver flowering stage11.578
SRR8316905Silver flowering stage5.578
SRR8316906Gold flowering stage 25.098
SRR8316907Gold flowering stage 12.807
SRR8316908Gold flowering stage 19.719
SRP132670SRR6706286Control18.961
SRR6706287Light intensity 50%18.783
SRR6706288Light intensity 20%17.307
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.485
CNS0095593Slightly white alabastrum(diploid) 213.381
CNS0095594Slightly white alabastrum(diploid) 312.335
CNS0095595Whole white alabastrum(diploid) 221.949
CNS0095596Whole white alabastrum(diploid) 316.090
CNS0095597Whole white alabastrum(diploid) 424.138
CNS0095598Silvery flower (diploied) 110.662
CNS0095599Silvery flower (diploied) 218.176
CNS0095600Silvery flower (diploied) 327.311
CNS0095601Golden flower (diploid) 120.285
CNS0095602Golden flower (diploid) 241.242
CNS0095603Golden flower (diploid) 339.654
CNS0095604Slightly white alabastrum(tetraploid) 16.012
CNS0095605Slightly white alabastrum(tetraploid) 26.586
CNS0095606Slightly white alabastrum(tetraploid) 38.159
CNS0095607Whole white alabastrum(tetraploid) 112.445
CNS0095608Whole white alabastrum(tetraploid) 218.883
CNS0095609Whole white alabastrum(tetraploid) 312.469
CNS0095610Silvery flower (tetraploid) 111.366
CNS0095611Silvery flower (tetraploid) 210.160
CNS0095612Silvery flower (tetraploid) 312.008
CNS0095613Golden flower (tetraploid) 15.540
CNS0095614Golden flower (tetraploid) 28.716
CNS0095615Golden flower (tetraploid) 37.215
CRA001975CRR073297Stem 113.728
CRR073298Stem 212.077
CRR073299Stem 312.865
CRR073300Leaf 118.350
CRR073301Leaf 211.803
CRR073302Leaf 313.878
CRR073303Juvenile bud 116.544
CRR073304Juvenile bud 217.962
CRR073305Juvenile bud 313.858
CRR073306Third green 122.072
CRR073307Third green 216.690
CRR073308Third green 319.368
CRR073309Second white 120.746
CRR073310Second white 219.619
CRR073311Second white 316.212
CRR073312Silver flowering 129.574
CRR073313Silver flowering 227.232
CRR073314Silver flowering 330.305
CRR073315Gold flowering 16.647
CRR073316Gold flowering 213.275
CRR073317Gold flowering 310.501
CRR073318Tawny withering 122.424
CRR073319Tawny withering 237.653
CRR073320Tawny withering 322.195